[ome-users] Bioformats Problem

Joshua Bembenek jnbembenek at gmail.com
Thu May 17 12:22:20 BST 2012


Hello,

I am getting this error when opening files in Bioformats.


loci.formats.FormatException: Unable to locate at lease one valid STK file!
       at loci.formats.in.MetamorphReader.initFile(MetamorphReader.java:519)
       at loci.formats.FormatReader.setId(FormatReader.java:1072)
       at loci.plugins.in.ImportProcess.initializeFile(ImportProcess.java:481)
       at loci.plugins.in.ImportProcess.execute(ImportProcess.java:144)
       at loci.plugins.in.Importer.showDialogs(Importer.java:125)
       at loci.plugins.in.Importer.run(Importer.java:77)
       at loci.plugins.LociImporter.run(LociImporter.java:79)
       at ij.IJ.runUserPlugIn(IJ.java:184)
       at ij.IJ.runPlugIn(IJ.java:151)
       at ij.Executer.runCommand(Executer.java:124)
       at ij.Executer.run(Executer.java:61)
       at java.lang.Thread.run(Thread.java:655)


I am using ImageJ 1.43u with Java 1.5.0_30 (32-bit). What am I doing wrong?



On Wed, May 16, 2012 at 5:32 PM,
<ome-users-owner at lists.openmicroscopy.org.uk> wrote:
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> ---------- Forwarded message ----------
> From: Joshua Bembenek <jnbembenek at gmail.com>
> To: ome-users at lists.openmicroscopy.org.uk
> Cc:
> Date: Wed, 16 May 2012 17:32:03 -0400
> Subject: Bioformats Problem
> Hello,
>
> I am getting this error when opening files in Bioformats.
>
>
> loci.formats.FormatException: Unable to locate at lease one valid STK file!
>        at loci.formats.in.MetamorphReader.initFile(MetamorphReader.java:519)
>        at loci.formats.FormatReader.setId(FormatReader.java:1072)
>        at loci.plugins.in.ImportProcess.initializeFile(ImportProcess.java:481)
>        at loci.plugins.in.ImportProcess.execute(ImportProcess.java:144)
>        at loci.plugins.in.Importer.showDialogs(Importer.java:125)
>        at loci.plugins.in.Importer.run(Importer.java:77)
>        at loci.plugins.LociImporter.run(LociImporter.java:79)
>        at ij.IJ.runUserPlugIn(IJ.java:184)
>        at ij.IJ.runPlugIn(IJ.java:151)
>        at ij.Executer.runCommand(Executer.java:124)
>        at ij.Executer.run(Executer.java:61)
>        at java.lang.Thread.run(Thread.java:655)
>
>
> I am using ImageJ 1.43u with Java 1.5.0_30 (32-bit). What am I doing wrong?
>



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