[ome-users] help

[David Gault (Staff)]

Hi Katharine,

Do the dimensions and metadata on the file look to be correct? If you have a sample file which we can test you can upload it to https://www.openmicroscopy.org/qa2/qa/upload/

With Thanks,
David Gault

On 20 Sep 2018, at 17:22, Katharine Hanlon <katharine.hanlon at irmc.cc<mailto:katharine.hanlon at irmc.cc>> wrote:

Hello,
I am trying to open a nikon raw NEF file using bioformats in Fiji. Image appears as black. Have tried checking scaling and unchecking scaling box. Have tried auto contrast and other solutions. Image always opens black. Is this a bug? Does xml data need to be embedded into NEF or not?
I am wanting to do spectral separation of image so need to keep NEF format if possible.
Please advise!
Thanks

Katharine Hanlon \ Medical Imaging Specialist
Scully-Welsh Cancer Center | Indian River Medical Center
1000 36th Street
Vero Beach, FL 32960
Tel:   772-226-4916
Fax:  772-226-4930




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