[ome-users] Import plate data from the FEI MORE as screen in OMERO

[Kai Schleicher]

Dear OME team,

I acquired a few images in a 96 plate 
<https://filesender.switch.ch/filesender/?vid=7ada3ba0-e2e2-9629-ca18-00001996de3c> 
(2 Wells, 4 images/well, 3 channels/ image) on an automated Widefield 
system (FEI MORE, using the Live Acquisition (LA) software v 2.6).

The data is saved as single tiffs with metadata. Additionally it saves 
one xml file per well that contains information about the sites imaged.

I would like to import this data in OMERO in the screen/plate format.

Both the image metadata and the xml file is supposedly compatible with 
the ome data model, but I did not yet find a configuration in which 
these images can be imported into OMERO as a plate/screen.

My question is hence if you could have a look and see if I am somewhat 
close to achieve my goal :)

Since its probably not so easy, could you let me know what else would be 
needed for OMERO to import these images as a screen?

Thanks and cheers,
Kai

-- 
>>Please note my NEW PHONE NUMBERS: +41 61 207 57 31 (direct) +41 61 207 22 50 (central)<<
Kai Schleicher, PhD | Research Associate in Advanced Light Microscopy | Biozentrum, University of Basel | Klingelbergstrasse 50/70 | CH-4056 Basel |
Phone: +41 61 207 57 31 (direct) +41 61 207 22 50 (central) | kai.schleicher at unibas.ch | www.biozentrum.unibas.ch | www.microscopynetwork.unibas.ch

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