[ome-users] Orbit Image Analysis 2.65 with new segmentation algo, bioformats 5.5.3, fluo options

Kai Schleicher kai.schleicher at unibas.ch
Mon Jul 17 10:37:53 BST 2017


Hey Manuel,

thanks for the new version and for the new features!

I have to say I am amazed by the new segmentation algorithm! Looks like 
magic to me :D

Iooking forward to give it a try,
Kai


On 07/13/2017 02:47 PM, Manuel Stritt wrote:
>
> Dear all,
>
> today I released the new Orbit version 2.65 with bioformats 5.5.3 and 
> many new features. Omero 5.3.x support.
> It can be used to analyze whole slide images (WSI) standalone or via 
> Omero.
>
> - The result of a collaboration with the ZHAW is a Mumford-Shah based 
> segmentation algorithm which is
> able to segment cells within dense cell clusters:
> http://www.orbit.bio/2017/07/13/cell-cluster-segmentation/
>
> - More fluo options, e.g. you can have individual channel-color 
> assignments
>
> - Improved tile caching (speed improvement)
>
> - Bugfix for 16bit images
>
> If you're interested, please give it a try: http://www.orbit.bio
>
>
> And again, thanks to OME for the great bioformats library!
>
> Regards,
> Manuel
>
>
>
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