[ome-users] Orbit Image Analysis 2.65 with new segmentation algo, bioformats 5.5.3, fluo options

[Manuel Stritt]

Dear all,

today I released the new Orbit version 2.65 with bioformats 5.5.3 and many
new features. Omero 5.3.x support.
It can be used to analyze whole slide images (WSI) standalone or via Omero.

- The result of a collaboration with the ZHAW is a Mumford-Shah based
segmentation algorithm which is
able to segment cells within dense cell clusters:
http://www.orbit.bio/2017/07/13/cell-cluster-segmentation/

- More fluo options, e.g. you can have individual channel-color assignments

- Improved tile caching (speed improvement)

- Bugfix for 16bit images

If you're interested, please give it a try: http://www.orbit.bio


And again, thanks to OME for the great bioformats library!

Regards,
Manuel

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