[ome-users] nd2 XYZT file that causes an exception

Aryeh Weiss aryeh at cc.huji.ac.il
Thu Mar 17 12:32:44 GMT 2016

Bioformats (from within Fiji) throws an exception when importing an 
XYZT  nd2 file.
I reported the bug with the FIji bug reporter, and they suggested that I 
post it here.
Here is the link to the Fiji bugzilla report:

I uploaded the image using this link:

I use the Fiji updater to keep my Bioformats up to date.

Here are the first few lines of the exception:
(Fiji Is Just) ImageJ 2.0.0-rc-46/1.50i3; Java 1.8.0_71 [64-bit]; Mac OS 
X 10.11.3; 37MB of 13933MB (<1%)

java.lang.StringIndexOutOfBoundsException: String index out of range: -6
     at java.lang.String.substring(String.java:1967)
     at loci.formats.in.NativeND2Reader.parseText(NativeND2Reader.java:2239)
     at loci.formats.in.NativeND2Reader.initFile(NativeND2Reader.java:748)
     at loci.formats.FormatReader.setId(FormatReader.java:1426)

Thanks in advance for your assistance.

Aryeh Weiss
Faculty of Engineering
Bar Ilan University
Ramat Gan 52900 Israel

Ph:  972-3-5317638
FAX: 972-3-7384051

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