[ome-users] Trouble with compression using Bio Formats

[Balaji Ramalingam (Staff)]

Hi,

Thank you for submitting your file,
Am afraid, we currently do not support this codec/compression type in the video and I have filed a ticket on this regard,
https://trac.openmicroscopy.org/ome/ticket/13178#ticket

and you have been added to the CC list.
Notifications will be sent to your email id, when there is a status change on the ticket.

For the time being these are the codecs/compression types that we support for '.avi' files,
MS RLE, MS_VIDEO, CINEPAK,JPEG,Y8.

As a temporary solution, you could use some video converter to save the files in one of the above mentioned codecs and try reimporting the video into FIJI, using Bio-Formats. It would also help if you could check, if your acquisition camera can capture and save the video in one of these supported codecs.

Hope that helps.

Best,
Balaji

__________________

Mr Balaji Ramalingam

Software Developer

OME Team

College of Life Sciences

University of Dundee

From: Jake GEYEN <geyen at wisc.edu<mailto:geyen at wisc.edu>>
Reply-To: OME User Support List <ome-users at lists.openmicroscopy.org.uk<mailto:ome-users at lists.openmicroscopy.org.uk>>
Date: Wednesday, 16 March 2016 20:26
To: "ome-users at lists.openmicroscopy.org.uk<mailto:ome-users at lists.openmicroscopy.org.uk>" <ome-users at lists.openmicroscopy.org.uk<mailto:ome-users at lists.openmicroscopy.org.uk>>
Subject: [ome-users] Trouble with compression using Bio Formats


Hello,


The attached .avi file will not open using Bio Formats. I am relatively new to formatting videos so I may be missing something simple. I have tried converting it to a different type using VLC, and I have Fiji with Bio Formats plugin installed.


Thanks,


Jake

The University of Dundee is a registered Scottish Charity, No: SC015096
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