[ome-users] Upgrade problem

[Anatole Chessel]

That did work, omero seem to start normally! Simon, I owe you a beer.

OMERO.web is still broken however, in the same way as with 
ice3.5/python2.7 64bits (see the forum thread linked below), ie, with an 
error logged by 'ISAPI Filter or Extention' saying 'Failed to import 
callback module 'omero_web_iis' The system cannot find the file 
specified.'. However that is most likely a completely separate error, 
due to my iis being strangely configured...

Thanks
A.


On 18/09/2014 11:01, Simon Li wrote:
> Can you try deleting the OMERO.server-5.0.4-ice34-b43\var directory 
> and seeing if OMERO starts up?
>
> Simon
>
> On 18/09/2014 10:55, "Anatole Chessel" 
> <anatole.chessel at gurdon.cam.ac.uk 
> <mailto:anatole.chessel at gurdon.cam.ac.uk>> wrote:
>
>
>     Actually, I just realised that a bunch of errors/informations are
>     logged in the windows event viewer, which may help diagnose things:
>     4 information events, from OMERO.master:
>     -'Berkeley DB: DbEnv "Registry": Unacceptable log file
>     C:\Users\omero\Desktop\OMERO.server-5.0.4-ice34-b43\var\registry\log.0000000001:
>     unsupported log version 19'
>     -'Berkeley DB: DbEnv "Registry": Invalid log file: log.0000000001:
>     Invalid argument'
>     -'Berkeley DB: DbEnv "Registry": PANIC: Invalid argument'
>     -'Berkeley DB: DbEnv "Registry": process-private: unable to find
>     environment'
>
>     2 errors events, the first from OMERO.master, the second from
>     Service Control Manager:
>     -'exception occurred while initializing a communicator:
>     SharedDbEnv.cpp:619: Freeze::DatabaseException:
>     DbEnv::open: DB_RUNRECOVERY: Fatal error, run database recovery'
>     -'The OMERO.master service terminated with service-specific error
>     Incorrect function..'
>
>     Hope that helps,
>     A.
>
>     On 17/09/2014 13:57, Anatole Chessel wrote:
>>     Hi all,
>>
>>     I seem to be having the exact same problem. I am trying to
>>     upgrade from 4.4 to 5.0.4 on a windows server 2008R2; after
>>     trying without success the OME compiled ice3.5/python2.7 64bit
>>     (full thread:
>>     http://www.openmicroscopy.org/community/viewtopic.php?f=5&t=7629&start=10
>>     in short omero eventually worked but omero.web did not), I tried
>>     ice3.4/python2.6 32bits with the same issues as Jason: 'Failed to
>>     startup some components after 300 seconds' and no logs, and
>>     launching manually gives a logfile with the same error he just
>>     reported...
>>
>>     Many thanks,
>>     A.
>>
>>
>>     On 17/09/2014 13:36, Kotecki, Jason wrote:
>>>     Josh, attached is the task list. Also, I ran the command for blitz manually and that actually created a log file.
>>>
>>>     Thanks,
>>>     Jason
>>>

(...)

-- 
Anatole Chessel, PhD
Research associate
University of Cambridge
Tennis Court Road, Cambridge CB2 1PD
tel: +44 (0)1223 334065

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