[ome-users] Bioformats bug

William Moore will at lifesci.dundee.ac.uk
Tue Apr 22 09:40:42 BST 2014


Hi David,

 Thanks for your feedback, you can upload example files at http://qa.openmicroscopy.org.uk/qa/upload/
We'll have a look and get back to you,

 Regards,

  Will.


On 21 Apr 2014, at 21:34, "Knecht, David" <david.knecht at uconn.edu> wrote:

> I tried to import a Nikon nd2 file today using Bioformats.  This normally works, and works for other files, but this data is a line scan z series and somehow the data must be saved in a different way as it does not open correctly in Fiji/ImageJ.  The image comes through as a stack of 3 images rather than a single image and the pixel values and locations are wrong. I can send a sample nd2 file.  Dave
> 
> David Knecht, Ph.D.    
> Professor and Head of Core Microscopy Facility
> Department of Molecular and Cell Biology
> U-3125
> 91 N. Eagleville Rd.
> University of Connecticut
> Storrs, CT 06269
> 860-486-2200
> 860-486-4331 (fax)
> 
> 
> 
> 
> 
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