[ome-users] Loci bug opening Aperio svs file

[Curtis Rueden]

Hi Serena,

[CCing ome-users again.]

> Maby using the FTP server should be easier to upload svs files.

Yes, hopefully someone on the OMERO team can send you the login credentials
off-list (I don't have them).

Regards,
Curtis


On Fri, Jun 21, 2013 at 5:40 AM, Serena Buscone <serena.buscone at gmail.com>wrote:

> Hi Curtis,
> thank you very much for your answer,  i tried to upload the images in omero
> but because i can't find find the svs file format in the list i can't
> upload them.
> I can change the file format in TIFF one but without compression each image
> become larger than 2 GB.
> Maby using the FTP server should be easier to upload svs files.
>
> Thanks for your collaboration
> Serena
>
>
>
> 2013/6/20 Curtis Rueden <ctrueden at wisc.edu>
>
> > Hi Serena,
> >
> > Thanks for the bug report.
> >
> > [CCing the ome-users list, which is the best place to discuss Bio-Formats
> > issues.]
> >
> > > Hi all, i work with fluorescence whole slide images obtained with an
> > > Aperio Scanner. I tried to open those svs files in imageJ and Fiji
> > > with LOCI plugin but it doesn't work. Some one can suggest me how to
> > > solve this problem ?
> >
> > Could you please upload a sample non-working SVS file? It would help us
> > diagnose and fix the problem.
> >
> > If file is 500 MB or less, you can use:
> > http://qa.openmicroscopy.org.uk/qa/upload/
> >
> > Or if larger, let us know and we will send you FTP server credentials
> > off-list.
> >
> > Thanks,
> > Curtis
> >
> >
> > On Thu, Jun 20, 2013 at 4:58 AM, Serena Buscone <
> serena.buscone at gmail.com
> > >wrote:
> >
> > > Hi all, i work with fluorescence whole slide images obtained with an
> > > Aperio Scanner. I tried to open those svs files in imageJ and Fiji with
> > > LOCI plugin but it doesn't work. Some one can suggest me how to solve
> > this
> > > problem ?
> > > Thank you very much
> > >
> > > --
> > > ImageJ mailing list: http://imagej.nih.gov/ij/list.html
> > >
> >
> > --
> > ImageJ mailing list: http://imagej.nih.gov/ij/list.html
> >
>
> --
> ImageJ mailing list: http://imagej.nih.gov/ij/list.html
>
-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://lists.openmicroscopy.org.uk/pipermail/ome-users/attachments/20130621/0dbd89ea/attachment.html>