[ome-users] Mirror before stitching?

[Björn Quast]

Hi Sam,

I am not sure if i understood the problem, but perhaps changing the naming scheme is an 
idea? Thus starting the stitching with the last image, because in this way the images change 
their side relative to the next row?

Björn





Am Sonntag, 16. Juni 2013, 10:00:56 schrieb Sam Lord:


Importing stacks from Micro-Manager works well using Bio-Formats Importer, and the 
stacks option seems to read location directly from metadata. The only issue I have is that 
my camera must be rotated 180 degrees, because the columns stitch together well, but 
each row is upside-down. 


​I tried importing the stack, flipping, exporting, then reimorting, but something must have 
gotten lost in the metadata in that maneuver. 


​Any chance there is a simple way to tell the stitching that the images are flipped? 




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