[ome-users] APERIO SVS files? => uploaded examples of SVS and CWS slides

Cornelissen, Frans [PRDBE] FCORNELI at its.jnj.com
Thu Jul 23 09:07:30 BST 2009


Jason, Melissa,

 

I have uploaded some examples to the GLENCOE FTP site

 

Folder :

APERIO_SVS

Files :

C05_2093.svs  400 MB

3284.svs 35 MB

 

also as CWS (composite Web Slide)

 

Folder : CWS

Files:

C05_2093_CWS  120 MB

C03  55MB

 

 

cheers, frans

 

-----Original Message-----
From: Jason Swedlow [mailto:jason at lifesci.dundee.ac.uk] 
Sent: Sunday, 19 July 2009 7:43 PM
To: Cornelissen, Frans [PRDBE]
Cc: ome-users at lists.openmicroscopy.org.uk
Subject: Re: [ome-users] opening APERIO svs files?

 

Hi Frans-

 

Yes, you are correct, Aperio files are supported in Bio-Formats.  Once
we get more data, and a good partner to work with to ensure our metadata
support and presentation of the data are correct, we'll be able to get
SVS into OMERO.  We have some stitching facilities in Bio-Formats now
and will be working to extend them in OMERO.  If you have an Aperio
system and would like to help us get the Aperio file format working in
OMERO, let us know.

 

Cheers,

 

Jason

 

 

On 19 Jul 2009, at 10:56, Cornelissen, Frans [PRDBE] wrote:





Hi,

What is the status of support for APERIO .SVS files in OMERO /
BioFormats?
I saw some tickets about this...

Thanks, best regards, 
Frans cornelissen
JnJ Pharma R&D IT
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