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<p class=MsoNormal><font size=2 color=navy face=Arial><span style='font-size:
10.0pt;font-family:Arial;color:navy'>Jason, Melissa,</span></font></p>

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10.0pt;font-family:Arial;color:navy'> </span></font></p>

<p class=MsoNormal><font size=2 color=navy face=Arial><span style='font-size:
10.0pt;font-family:Arial;color:navy'>I have uploaded some examples to the
GLENCOE FTP site</span></font></p>

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10.0pt;font-family:Arial;color:navy'> </span></font></p>

<p class=MsoNormal><font size=2 color=navy face=Arial><span style='font-size:
10.0pt;font-family:Arial;color:navy'>Folder :</span></font></p>

<p class=MsoNormal><font size=2 color=navy face=Arial><span style='font-size:
10.0pt;font-family:Arial;color:navy'>APERIO_SVS</span></font></p>

<p class=MsoNormal><font size=2 color=navy face=Arial><span style='font-size:
10.0pt;font-family:Arial;color:navy'>Files :</span></font></p>

<p class=MsoNormal><font size=2 color=navy face=Arial><span style='font-size:
10.0pt;font-family:Arial;color:navy'>C05_2093.svs  400 MB</span></font></p>

<p class=MsoNormal><font size=2 color=navy face=Arial><span style='font-size:
10.0pt;font-family:Arial;color:navy'>3284.svs 35 MB</span></font></p>

<p class=MsoNormal><font size=2 color=navy face=Arial><span style='font-size:
10.0pt;font-family:Arial;color:navy'> </span></font></p>

<p class=MsoNormal><font size=2 color=navy face=Arial><span style='font-size:
10.0pt;font-family:Arial;color:navy'>also as CWS (composite Web Slide)</span></font></p>

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10.0pt;font-family:Arial;color:navy'> </span></font></p>

<p class=MsoNormal><font size=2 color=navy face=Arial><span style='font-size:
10.0pt;font-family:Arial;color:navy'>Folder : CWS</span></font></p>

<p class=MsoNormal><font size=2 color=navy face=Arial><span style='font-size:
10.0pt;font-family:Arial;color:navy'>Files:</span></font></p>

<p class=MsoNormal><font size=2 color=navy face=Arial><span style='font-size:
10.0pt;font-family:Arial;color:navy'>C05_2093_CWS  120 MB</span></font></p>

<p class=MsoNormal><font size=2 color=navy face=Arial><span style='font-size:
10.0pt;font-family:Arial;color:navy'>C03  55MB</span></font></p>

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10.0pt;font-family:Arial;color:navy'> </span></font></p>

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10.0pt;font-family:Arial;color:navy'> </span></font></p>

<p class=MsoNormal><font size=2 color=navy face=Arial><span style='font-size:
10.0pt;font-family:Arial;color:navy'>cheers, frans</span></font></p>

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10.0pt;font-family:Arial;color:navy'> </span></font></p>

<p class=MsoNormal style='margin-left:36.0pt'><font size=2 face=Tahoma><span
style='font-size:10.0pt;font-family:Tahoma'>-----Original Message-----<br>
<b><span style='font-weight:bold'>From:</span></b> Jason Swedlow
[mailto:jason@lifesci.dundee.ac.uk] <br>
<b><span style='font-weight:bold'>Sent:</span></b> </span></font><font size=2 face=Tahoma><span style='font-size:10.0pt;font-family:Tahoma'>Sunday, 19 July
 2009</span></font><font size=2 face=Tahoma><span style='font-size:10.0pt;
font-family:Tahoma'> </span></font><font size=2 face=Tahoma><span
 style='font-size:10.0pt;font-family:Tahoma'>7:43 PM</span></font><font size=2
face=Tahoma><span style='font-size:10.0pt;font-family:Tahoma'><br>
<b><span style='font-weight:bold'>To:</span></b> Cornelissen, Frans [PRDBE]<br>
<b><span style='font-weight:bold'>Cc:</span></b> ome-users@lists.openmicroscopy.org.uk<br>
<b><span style='font-weight:bold'>Subject:</span></b> Re: [ome-users] opening
APERIO svs files?</span></font></p>

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<p class=MsoNormal style='margin-left:36.0pt'><font size=3
face="Times New Roman"><span style='font-size:12.0pt'>Hi Frans-</span></font></p>

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<p class=MsoNormal style='margin-left:36.0pt'><font size=3
face="Times New Roman"><span style='font-size:12.0pt'>Yes, you are correct,
Aperio files are supported in Bio-Formats.  Once we get more data, and a
good partner to work with to ensure our metadata support and presentation of
the data are correct, we'll be able to get SVS into OMERO.  We have some
stitching facilities in Bio-Formats now and will be working to extend them in
OMERO.  If you have an Aperio system and would like to help us get the
Aperio file format working in OMERO, let us know.</span></font></p>

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<p class=MsoNormal style='margin-left:36.0pt'><font size=3
face="Times New Roman"><span style='font-size:12.0pt'>Cheers,</span></font></p>

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face="Times New Roman"><span style='font-size:12.0pt'> </span></font></p>

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<p class=MsoNormal style='margin-left:36.0pt'><font size=3
face="Times New Roman"><span style='font-size:12.0pt'>Jason</span></font></p>

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face="Times New Roman"><span style='font-size:12.0pt'> </span></font></p>

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face="Times New Roman"><span style='font-size:12.0pt'> </span></font></p>

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<p class=MsoNormal style='margin-left:36.0pt'><font size=3
face="Times New Roman"><span style='font-size:12.0pt'>On 19 Jul 2009, at 10:56,
Cornelissen, Frans [PRDBE] wrote:</span></font></p>

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face="Times New Roman"><span style='font-size:12.0pt'><br>
<br>
</span></font></p>

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<p class=MsoNormal style='margin-left:36.0pt'><font size=3
face="Times New Roman"><span style='font-size:12.0pt'>Hi,<br>
<br>
What is the status of support for APERIO .SVS files in OMERO /<br>
BioFormats?<br>
I saw some tickets about this...<br>
<br>
Thanks, best regards, <br>
Frans cornelissen<br>
JnJ Pharma R&D IT<br>
_______________________________________________<br>
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<p class=MsoNormal style='margin-left:36.0pt'><font size=1 color=black
face=Arial><span style='font-size:9.0pt;font-family:Arial;color:black'>Wellcome
Trust Centre for Gene Regulation & Expression</span></font></p>

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<p class=MsoNormal style='margin-left:36.0pt'><font size=1 color=black
face=Arial><span style='font-size:9.0pt;font-family:Arial;color:black'>College
of Life Sciences</span></font></p>

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<p class=MsoNormal style='margin-left:36.0pt'><font size=1 color=black
face=Arial><span style='font-size:9.0pt;font-family:Arial;color:black'>MSI/WTB/JBC
Complex</span></font></p>

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size=1 color=black face=Helvetica><span style='font-size:9.0pt;font-family:
Helvetica;color:black'>University of Dundee</span></font></span></p>

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size=1 color=black face=Helvetica><span style='font-size:9.0pt;font-family:
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size=1 color=black face=Helvetica><span style='font-size:9.0pt;font-family:
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size=1 color=black face=Helvetica><span style='font-size:9.0pt;font-family:
Helvetica;color:black'>phone (01382) 385819</span></font></span></p>

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<p class=MsoNormal style='margin-left:36.0pt'><span class=apple-style-span><font
size=1 color=black face=Helvetica><span style='font-size:9.0pt;font-family:
Helvetica;color:black'>Intl phone:  44 1382 385819 </span></font></span></p>

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<p class=MsoNormal style='margin-left:36.0pt'><span class=apple-style-span><font
size=1 color=black face=Helvetica><span style='font-size:9.0pt;font-family:
Helvetica;color:black'>FAX   (01382) 388072 </span></font></span></p>

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<p class=MsoNormal style='margin-left:36.0pt'><span class=apple-style-span><font
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<p class=MsoNormal style='margin-left:36.0pt'><span class=apple-style-span><font
size=1 color=black face=Helvetica><span style='font-size:9.0pt;font-family:
Helvetica;color:black'>Lab Page: <a
href="http://www.dundee.ac.uk/lifesciences/swedlow/">http://www.dundee.ac.uk/lifesciences/swedlow/</a></span></font></span></p>

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<p class=MsoNormal style='margin-left:36.0pt'><span class=apple-style-span><font
size=1 color=black face=Helvetica><span style='font-size:9.0pt;font-family:
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href="http://openmicroscopy.org">http://openmicroscopy.org</a></span></font></span></p>

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<p class=MsoNormal style='margin-left:36.0pt'><font size=1 color=black
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