[ome-users] Slidebook sld file opening error

[Will Moore]

Hi Alex,

  You can delete images in Insight by right-clicking, and choose  
"Delete" from the pop-up menu.
Should work for failed imports too.

Will.


On 22 Jul 2009, at 11:14, Alex Sossick wrote:

> Hi Melissa
>
> Thanks for that
>
> This does raise another question about being able to delete files from
> omero, as  in this case the files have partially loaded into omero  
> and are
> corrupted.
>
> Is there away to delete files, (or will there be)
>
> Thanks
>
> Alex
>
>
>
> Melissa Linkert at melissa at glencoesoftware.com wrote on 21/7/09 19:36:
>
>> Hi Alex,
>>
>> Thanks again for reporting this, and for sending the problematic file
>> off-list.
>>
>> The latest trunk build of Bio-Formats contains several fixes that  
>> allow your
>> Slidebook file to be read.  You can download the latest trunk  
>> build at
>> http://loci.wisc.edu/ome/formats-download.html.
>>
>> However, OMERO.importer has not been updated to include these  
>> fixes, so you
>> will
>> not yet be able to import the file into OMERO.
>>
>> Regards,
>> -Melissa
>>
>> Melissa Linkert wrote:
>>> Hi Alex,
>>>
>>> Thanks for reporting this - it's definitely a bug in Bio- 
>>> Formats.  If
>>> possible, it would be very helpful if you could send the problematic
>>> file, as all of the Slidebook files we have are opened correctly.  I
>>> will send you our FTP server information off list, in case you  
>>> need a
>>> place to put the file.
>>>
>>>> On the subject are there any plans to support the import of spool
>>> files from
>>>> slidebook?
>>>
>>> We can certainly add support for Slidebook spool files, but would  
>>> need a
>>> few example files in order to do so.
>>>
>>> Regards,
>>> -Melissa
>>>
>>> Alex Sossick wrote:
>>>> Dear All
>>>>
>>>> I was wondering whether anyone had encountered any issues opening
>>>> slidebook
>>>> .sld files
>>>> I have a single channel file that is just over 1Gb (the smallest  
>>>> I could
>>>> get) and it seems to read part way and then say its unreadable.
>>>>
>>>> I notice in the logs it appears to be opening the time points as
>>>> channels.
>>>> (see below)
>>>>
>>>> On the subject are there any plans to support the import of spool
>>>> files from
>>>> slidebook?
>>>>
>>>> Alex
>>>>
>>>
>
> -- 
> Alex Sossick
> Wellcome Trust/Cancer Research UK Gurdon Institute
> University of Cambridge
> Tennis Court Rd
> Cambridge CB2 1QN
> UK
>
> email ajs17 at cam.ac.uk
> tel 01223 334082
>
>
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> ome-users at lists.openmicroscopy.org.uk
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William Moore
Division of Gene Regulation and Expression
College of Life Sciences
University of Dundee
Scotland
DD1 5PH

Tel 01382 386364

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