[ome-users] metadata access from ome web interface

Curtis Rueden ctrueden at wisc.edu
Tue Jun 17 17:42:56 BST 2008


Hi James,

I recently installed the OME perl server and have been uploading stack
> images taken via metamorph. However, the custom annotations we input at time
> of image acquisition from metamorph is lost through the image import. I have
> been going over the documentation but cannot find anything describing a way
> to import/access the metadata from the perl web interface. Is this possible?
>

For a list of what was recognized for a particular import into the
OMEserver, go to the
Image details page in the web interface, and click the "Image import" link
in the upper right hand box.

For Metamorph STK files, the supported fields will differ depending on if
you are using OME's default STK import module, or Bio-Formats. For more
information, including instructions on how to enable Bio-Formats for STK,
see this post:

http://lists.openmicroscopy.org.uk/pipermail/ome-users/2008-January/000776.html

-Curtis
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