[ome-users] Image import problem
Brian Ruttenberg
berutten at cs.ucsb.edu
Thu Feb 8 19:52:29 GMT 2007
Hi, I'm a relatively new OME user and I'm having some problems with some
image importing, so I was wondering if anyone out there could give me a
hand...
I start an OME import on a bunch of images, then after a
non-deterministic time (the failure doesn't always happen in the same
place), I get this error:
Importing files
1/296: [IN PROGRESS] Starting import
15/296: [IN PROGRESS] Uploaded /tmp/tmp.aMOzSN6790/125P5.TIF
29/296: [IN PROGRESS] Uploaded /tmp/tmp.aMOzSN6790/161NP7.TIF
42/296: [IN PROGRESS] Uploaded /tmp/tmp.aMOzSN6790/161P8.TIF
46/296: [IN PROGRESS] Uploaded /tmp/tmp.aMOzSN6790/1DMIP4.TIF
49/296: [IN PROGRESS] Uploaded /tmp/tmp.aMOzSN6790/1DMP12.TIF
54/296: [IN PROGRESS] Uploaded /tmp/tmp.aMOzSN6790/1DP42.TIF
Died at /usr/local/share/perl/5.8.8/OME/Image/Server.pm line 414.
Exiting...
55/296: [DIED] Uploaded /tmp/tmp.aMOzSN6790/1GVP30.TIF
Exiting...
Checking that portion of the code, it is dying because of this:
if ($curl->status() == 200) {
return ($response);
} else {
die $response;
So i checked the logs from the apache2 server I'm running, and it
looks...odd. The access log has this:
...
128.111.57.62 - - [08/Feb/2007:11:22:51 -0800] "POST /cgi-bin/omeis
HTTP/1.1" 200 4 "-" "-"
128.111.57.62 - - [08/Feb/2007:11:22:51 -0800] "POST /cgi-bin/omeis
HTTP/1.1" 200 4 "-" "-"
128.111.57.62 - - [08/Feb/2007:11:23:07 -0800] "POST /cgi-bin/omeis
HTTP/1.1" 200 - "-" "-"
If I'm reading this correct, apache is responding with an OK for a
while, then on the last omeis request it responds with an OK but returns
no data ( the '-' after the 200 I presume). The error.log also has this:
[Thu Feb 08 11:23:07 2007] [error] [client 128.111.57.62]
(104)Connection reset by peer: ap_content_length_filter:
apr_bucket_read() failed
which, with my limited apache experience, I'm not sure if that has any
affect on the import.
Has anyone encountered this error of similar errors before? I've
reinstalled OME several times, dropped the database, verified the omeis
executable, and I'm running out of options. Any help would be greatly
appreciated. Thank!
Brian
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