[ome-users] Image import problem

Brian Ruttenberg berutten at cs.ucsb.edu
Thu Feb 8 19:52:29 GMT 2007


Hi, I'm a relatively new OME user and I'm having some problems with some 
image importing, so I was wondering if anyone out there could give me a 
hand...

I start an OME import on a bunch of images, then after a 
non-deterministic time (the failure doesn't always happen in the same 
place), I get this error:

Importing files
         1/296: [IN PROGRESS] Starting import
         15/296: [IN PROGRESS] Uploaded /tmp/tmp.aMOzSN6790/125P5.TIF
         29/296: [IN PROGRESS] Uploaded /tmp/tmp.aMOzSN6790/161NP7.TIF
         42/296: [IN PROGRESS] Uploaded /tmp/tmp.aMOzSN6790/161P8.TIF
         46/296: [IN PROGRESS] Uploaded /tmp/tmp.aMOzSN6790/1DMIP4.TIF
         49/296: [IN PROGRESS] Uploaded /tmp/tmp.aMOzSN6790/1DMP12.TIF
         54/296: [IN PROGRESS] Uploaded /tmp/tmp.aMOzSN6790/1DP42.TIF
Died at /usr/local/share/perl/5.8.8/OME/Image/Server.pm line 414.
Exiting...
         55/296: [DIED] Uploaded /tmp/tmp.aMOzSN6790/1GVP30.TIF
Exiting...

Checking that portion of the code, it is dying because of this:

        if ($curl->status() == 200) {
            return ($response);
        } else {
            die $response;

So i checked the logs from the apache2 server I'm running, and it 
looks...odd.  The access log has this:

...
128.111.57.62 - - [08/Feb/2007:11:22:51 -0800] "POST /cgi-bin/omeis 
HTTP/1.1" 200 4 "-" "-"
128.111.57.62 - - [08/Feb/2007:11:22:51 -0800] "POST /cgi-bin/omeis 
HTTP/1.1" 200 4 "-" "-"
128.111.57.62 - - [08/Feb/2007:11:23:07 -0800] "POST /cgi-bin/omeis 
HTTP/1.1" 200 - "-" "-"

If I'm reading this correct, apache is responding with an OK for a 
while, then on the last omeis request it responds with an OK but returns 
no data ( the '-' after the 200 I presume).  The error.log also has this:

[Thu Feb 08 11:23:07 2007] [error] [client 128.111.57.62] 
(104)Connection reset by peer: ap_content_length_filter: 
apr_bucket_read() failed

which, with my limited apache experience, I'm not sure if that has any 
affect on the import.

Has anyone encountered this error of similar errors before?  I've 
reinstalled OME several times, dropped the database, verified the omeis 
executable, and I'm running out of options.  Any help would be greatly 
appreciated.  Thank!

Brian

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