[ome-users] Image import problem

[Ilya Goldberg]

Uh, wow.  That's a new one on me.  Do you have a size limit set in  
your Apache configuration?
What is the version of Apache/mod_perl that you are running?
What's the OS?

Is the omeis running its file repository (usually /OME/OMEIS/) on its  
*local* filesystem?  If not, does your shared filesystem support  
fully posix-compliant file locking?

In our hands (on Fedora 4), we write many thousands of image files to  
omeis in one go without a hickup.

-Ilya

On Feb 8, 2007, at 2:52 PM, Brian Ruttenberg wrote:

> Hi, I'm a relatively new OME user and I'm having some problems with  
> some image importing, so I was wondering if anyone out there could  
> give me a hand...
>
> I start an OME import on a bunch of images, then after a non- 
> deterministic time (the failure doesn't always happen in the same  
> place), I get this error:
>
> Importing files
>         1/296: [IN PROGRESS] Starting import
>         15/296: [IN PROGRESS] Uploaded /tmp/tmp.aMOzSN6790/125P5.TIF
>         29/296: [IN PROGRESS] Uploaded /tmp/tmp.aMOzSN6790/161NP7.TIF
>         42/296: [IN PROGRESS] Uploaded /tmp/tmp.aMOzSN6790/161P8.TIF
>         46/296: [IN PROGRESS] Uploaded /tmp/tmp.aMOzSN6790/1DMIP4.TIF
>         49/296: [IN PROGRESS] Uploaded /tmp/tmp.aMOzSN6790/1DMP12.TIF
>         54/296: [IN PROGRESS] Uploaded /tmp/tmp.aMOzSN6790/1DP42.TIF
> Died at /usr/local/share/perl/5.8.8/OME/Image/Server.pm line 414.
> Exiting...
>         55/296: [DIED] Uploaded /tmp/tmp.aMOzSN6790/1GVP30.TIF
> Exiting...
>
> Checking that portion of the code, it is dying because of this:
>
>        if ($curl->status() == 200) {
>            return ($response);
>        } else {
>            die $response;
>
> So i checked the logs from the apache2 server I'm running, and it  
> looks...odd.  The access log has this:
>
> ...
> 128.111.57.62 - - [08/Feb/2007:11:22:51 -0800] "POST /cgi-bin/omeis  
> HTTP/1.1" 200 4 "-" "-"
> 128.111.57.62 - - [08/Feb/2007:11:22:51 -0800] "POST /cgi-bin/omeis  
> HTTP/1.1" 200 4 "-" "-"
> 128.111.57.62 - - [08/Feb/2007:11:23:07 -0800] "POST /cgi-bin/omeis  
> HTTP/1.1" 200 - "-" "-"
>
> If I'm reading this correct, apache is responding with an OK for a  
> while, then on the last omeis request it responds with an OK but  
> returns no data ( the '-' after the 200 I presume).  The error.log  
> also has this:
>
> [Thu Feb 08 11:23:07 2007] [error] [client 128.111.57.62] (104) 
> Connection reset by peer: ap_content_length_filter: apr_bucket_read 
> () failed
>
> which, with my limited apache experience, I'm not sure if that has  
> any affect on the import.
>
> Has anyone encountered this error of similar errors before?  I've  
> reinstalled OME several times, dropped the database, verified the  
> omeis executable, and I'm running out of options.  Any help would  
> be greatly appreciated.  Thank!
>
> Brian
>
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