[ome-users] installation problem on FC4

Bernd Jagla baj2107 at columbia.edu
Thu Jul 13 22:00:00 BST 2006 

Now what about this one:

I dropped the database and user ome and still get this message:

Are these values correct ? [y/n]:
--------------------
 Database Bootstrap
--------------------

(All verbose information logged in
/var/tmp/OME/install/CoreDatabaseTablesTask.log)

Finding DB configuration in installation environment [FOUND EXISTING].
Database connection information
N.B.:  The database host must already be installed and running.
It must already be configured for accepting the connection
specified here, or a superuser connection from user "postgres".
   Database Delegate Class: OME::Database::PostgresDelegate
             Database Name: ome
                      Host: undefined (local)
                      Port: undefined (default)
Username for DB connection: undefined (process owner)

Are these values correct ? [y/n]: n
Enter '\' to set to undefined
   Database Delegate Class:  [OME::Database::PostgresDelegate]:
             Database Name:  [ome]:
                      Host:  [undefined]: localhost
                      Port:  [undefined]:
Username for DB connection:  [undefined]:

   Database Delegate Class: OME::Database::PostgresDelegate
             Database Name: ome
                      Host: localhost
                      Port: undefined (default)
Username for DB connection: undefined (process owner)

Are these values correct ? [y/n]:
Creating OME PostgreSQL SUPERUSER (ome)[FAILURE].


Errors executing task: Unable to create PostgreSQL superuser 'ome', see
CoreDatabaseTablesTask.log for details.
Database error: FATAL:  Ident authentication failed for user "postgres"

 at (eval 193) line 1

 at install.pl line 81
        main::run_tasks() called at install.pl line 265
# Looks like your test died before it could output anything.




|-----Original Message-----
|From: Tom Macura [mailto:tm289 at cam.ac.uk]
|Sent: Thursday, July 13, 2006 4:33 PM
|To: Bernd Jagla
|Cc: OME users
|Subject: Re: [ome-users] installation problem on FC4
|
|Try running "sudo ome admin configure" on the command line to change
|the URL to the new location of OMEIS. Then try the install again.
|
|Tom
|
|On Jul 13, 2006, at 4:26 PM, Bernd Jagla wrote:
|
|> That worked until OME is trying to connect to OMEIS, which it
|> cannot reach
|> because it still thinks it is on the old computer:
|>
|>
|> Getting a session manager
|> Please log into OME to continue
|> N.B.: This ome experimenter will become the OME super user (no access
|> control)
|> Please login to OME:
|> Username? bernd
|> Password?
|> Great, you're in.
|>
|> Checking OMEIS repository [FAILURE].
|>
|>
|> Errors executing task: OMEIS could not be reached.  Did not get a
|> response
|> from
|> http://rbp05jagla6.cpmc.columbia.edu/cgi-bin/omeis.
|> See /var/tmp/OME/install/ApacheConfigTask.log for more details. at
|> /home/bernd/a
|> llOMEs/newOME/OME/src/perl2/OME/Install/CoreDatabaseTablesTask.pm
|> line 997
|>
|>  at install.pl line 81
|>         main::run_tasks() called at install.pl line 265
|> # Looks like your test died before it could output anything.
|>
|>
|> I guess I am finding "bugs" that only occur in VERY rare cases...
|> Sorry for that....
|>
|> Thanks for the help
|>
|> Bernd
|>
|>
|>
|>
|> |-----Original Message-----
|> |From: Ilya Goldberg [mailto:igg at nih.gov]
|> |Sent: Thursday, July 13, 2006 1:11 PM
|> |To: Bernd Jagla
|> |Cc: 'Josiah Johnston'; ome-users at lists.openmicroscopy.org.uk
|> |Subject: Re: [ome-users] installation problem on FC4
|> |
|> |
|> |On Jul 13, 2006, at 12:01 PM, Bernd Jagla wrote:
|> |
|> |> Josiah,
|> |>
|> |> Thanks for the help and it worked. Well at least this part.
|> |> Now I get the following error message:
|> |
|> |
|> |> Errors executing task: Can't locate object method
|> |> "allow_guest_access" via
|> |> package "OME::Configuration" at
|> |> /home/bernd/allOMEs/newOME/OME/src/perl2/OME/SessionManager.pm line
|> |> 461,
|> |> <STDIN> line 16.
|> |>
|> |>  at install.pl line 81
|> |>         main::run_tasks() called at install.pl line 265
|> |> # Looks like your test died before it could output anything.
|> |
|> |Hi Bernd
|> |Can you update from CVS and try again?
|> |The reason I ask is that there is no call to allow_guest_access on
|> |line 461 of OME/src/perl2/OME/SessionManager.pm in the version on
|> CVS.
|> |There was an update of this stuff yesterday afternoon - it could be
|> |that you got an in-between version?
|> |Sorry about that
|> |-Ilya
|> |
|> |
|> |>
|> |> ====================================
|> |>
|> |> Thanks for the kind help.... ;-)
|> |>
|> |> Best
|> |>
|> |> Bernd
|> |>
|> |>
|> |>
|> |> |-----Original Message-----
|> |> |From: Josiah Johnston [mailto:siah at mac.com]
|> |> |Sent: Wednesday, July 12, 2006 10:20 AM
|> |> |To: Bernd Jagla
|> |> |Cc: ome-users at lists.openmicroscopy.org.uk
|> |> |Subject: Re: [ome-users] installation problem on FC4
|> |> |
|> |> |I think I found your problem.  I left the relevant sections of the
|> |> |installation progress below.
|> |> |
|> |> |Some time in the past, you installed from /home/bernd/ome_cvs/OME,
|> |> and set
|> |> |the developer's HTML templates directory to be underneath that cvs
|> |> checkout.
|> |> |Since then, I believe you deleted or moved that directory. All the
|> |> |installation options, including the developer's template path, are
|> |> stored
|> |> |in /etc/ome-install.store
|> |> |This time around, you installed from /home/bernd/allOMEs/newOME/
|> |> OME, and
|> |> |the installer read your previous settings from the ome-
|> |> install.store file,
|> |> |including the now non-existent directory. When it saw there
|> were no
|> |> |templates at the given path, it tried to copy them, and presumably
|> |> failed
|> |> |because the higher level directories in the
|> |> |"/home/bernd/ome_cvs/OME/src/html/Templates" path no longer
|> existed.
|> |> |
|> |> |
|> |> |Ilya and I are thinking about how to change the installer to
|> |> reduce the
|> |> |risk of something like this happening in the future. In the
|> |> meantime, type
|> |> |"/home/bernd/allOMEs/newOME/OME/src/html/Templates/" when prompted
|> |> for the
|> |> |HTML Templates directory.
|> |> |
|> |> |
|> |> |-Josiah
|> |> |
|> |> |On Jul 11, 2006, at 11:14 AM, Bernd Jagla wrote:
|> |> |
|> |> |
|> |> |	...
|> |> |
|> |> |	Web-UI HTML Templates:
|> |> |
|> |> |	  Developer configuration: yes
|> |> |
|> |> |	 HTML Templates directory:
|> |> /home/bernd/ome_cvs/OME/src/html/Templates
|> |> |
|> |> |
|> |> |
|> |> |	Are these values correct ? [y/n]: y
|> |> |
|> |> |	...
|> |> |
|> |> |	Installing HTML Templates for Web-UI
|> |> |
|> |> |	  \__ Verifying structure of
|> |> |/home/bernd/ome_cvs/OME/src/html/Templates Can't stat
|> |> |/home/bernd/ome_cvs/OME/src/html/Templates: No such file or
|> directory
|> |> |
|> |> |	 at
|/home/bernd/allOMEs/newOME/OME/src/perl2/OME/Install/Util.pm
|> |> line
|> |> |570
|> |> |
|> |> |	[SUCCESS].
|> |> |
|> |> |	Templates structure doesn't exist; it will be created.
|> |> |
|> |> |	  \__ Updating user templates
|> |> |
|> |> |
|> |> |
|> |> |	Errors executing task: Couldn't copy file
|> |> |/home/bernd/allOMEs/newOME/OME/src/html/Templates/Actions/README:
|> |> No such
|> |> |file or directory at
|> |> |/home/bernd/allOMEs/newOME/OME/src/perl2/OME/Install/
|> |> ApacheConfigTask.pm
|> |> |line 1259
|> |> |
|> |> |	 ...
|> |> |
|> |> |
|> |>
|> |>
|> |> _______________________________________________
|> |> ome-users mailing list
|> |> ome-users at lists.openmicroscopy.org.uk
|> |> http://lists.openmicroscopy.org.uk/mailman/listinfo/ome-users
|> |>
|>
|> _______________________________________________
|> ome-users mailing list
|> ome-users at lists.openmicroscopy.org.uk
|> http://lists.openmicroscopy.org.uk/mailman/listinfo/ome-users

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