[ome-devel] attaching analysis results to OMERO images

[Will Moore]

Hi Adam,

You're looking at this page http://trac.openmicroscopy.org.uk/ome/wiki/OmeroTables 
  right?
I fixed a couple of links to source code (were broken because of our  
recent move to git) so I hope that helps.

Probably if you're doing the same analysis with the same result fields  
for every image in a Dataset, you should create a single table and  
link it to the Dataset or Project.

Let us know if you need any more help,

  Will.


On 22 Feb 2011, at 17:06, Adam Fraser wrote:

> Hi again,
>
> I'm wondering how difficult it is to attach tabular analysis results  
> as (eg: formatted as CSV) to images in an omero dataset. I'd like to  
> do this entirely from Python if possible.
>
> How it might be used:
> Attach a table containing segmentation results and per-object  
> measurements to each image.
> Attach a simple list (a 1-row table) of image measurements to each  
> image. I'm not sure if this would be useful to anyone, or if there's  
> another way to do this that makes more sense.... maybe tags? —  
> although it looks like tags are simply binary and can't necessarily  
> have a value associated with them.
> Attach a table to an entire dataset or project.
> I was looking at the OMERO Tables page on the wiki, but a bunch of  
> the examples are dead links, so I wonder if I should be looking  
> somewhere else.
>
> Thanks for your help!
> Adam
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> ome-devel at lists.openmicroscopy.org.uk
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William Moore
Wellcome Trust Centre for Gene Regulation & Expression
College of Life Sciences
MSI/WTB/JBC Complex
University of Dundee
Dow Street
Dundee  DD1 5EH
United Kingdom

Phone 01382 386364
http://openmicroscopy.org





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