[ome-devel] OME server install issue

Michael Porter m.porter at dundee.ac.uk
Wed May 28 17:31:16 BST 2008


I have been trying to install OME server on an Ubuntu 8.04 machine with 
the source taken off svn this morning. I am completely baffled by an 
error and wondered if anyone can help me. All of the dependancies 
*appear* to be ok, and all the perl modules pass inspection. I will 
paste in the troubled section below and attach the output files 
mentioned there.

Thanks in advance,

Michael Porter.


------------------------
Core Perl Module Setup
------------------------

(All verbose information logged in /var/tmp/OME/install/PerlModuleTask.log)

Installing modules
\_ Configuring [SUCCESS].
\_ Compiling [SUCCESS].
\_ Installing [SUCCESS].


Errors loading module: /usr/bin/perl /usr/share/perl/5.8/ExtUtils/xsubpp 
-typemap /usr/share/perl/5.8/ExtUtils/typemap cURL_79e0.xs > 
cURL_79e0.xsc && mv cURL_79e0.xsc cURL_79e0.c
cc -c -I/home/michael/OME -D_REENTRANT -D_GNU_SOURCE -DTHREADS_HAVE_PIDS 
-DDEBIAN -fno-strict-aliasing -pipe -I/usr/local/include 
-D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -O2 -DVERSION=\"0.00\" 
-DXS_VERSION=\"0.00\" -fPIC "-I/usr/lib/perl/5.8/CORE" cURL_79e0.c
cURL_79e0.xs: In function ‘new’:
cURL_79e0.xs:26: error: ‘CURLOPT_MUTE’ undeclared (first use in this 
function)
cURL_79e0.xs:26: error: (Each undeclared identifier is reported only once
cURL_79e0.xs:26: error: for each function it appears in.)
make: *** [cURL_79e0.o] Error 1

A problem was encountered while attempting to compile and install your 
Inline
C code. The command that failed was:
make > out.make 2>&1

The build directory was:
/OME/Inline/build/OME/Util/cURL_79e0

To debug the problem, cd to the build directory, and inspect the output 
files.

at /home/michael/OME/src/perl2/OME/Util/cURL.pm line 162
Compilation failed in require at 
/home/michael/OME/src/perl2/OME/Install/ApacheConfigTask.pm line 55.
BEGIN failed--compilation aborted at 
/home/michael/OME/src/perl2/OME/Install/ApacheConfigTask.pm line 55.
Compilation failed in require at (eval 184) line 3.

at install.pl line 79
main::run_tasks() called at install.pl line 266
# Looks like your test died before it could output anything.




-- 
Michael Porter
Wellcome Trust Centre for
Gene Regulation and Expression
College of Life Sciences
University of Dundee
Dow Street
Dundee
United Kingdom
DD1 5EH

+44(0)1382 388142
m.porter at dundee.ac.uk

The University of Dundee is a registered Scottish charity, No: SC015096


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