[ome-devel] OME server install issue
Curtis Rueden
ctrueden at wisc.edu
Wed May 28 18:16:04 BST 2008
Hi Michael,
Not sure if this is the main problem, but according to Google, CURLOPT_MUTE
was removed from curl at least a year and a half ago. So maybe your curl is
too new... or maybe you don't have curl installed at all? What does "curl
--version" tell you?
-Curtis
On Wed, May 28, 2008 at 11:31 AM, Michael Porter <m.porter at dundee.ac.uk>
wrote:
> I have been trying to install OME server on an Ubuntu 8.04 machine with the
> source taken off svn this morning. I am completely baffled by an error and
> wondered if anyone can help me. All of the dependancies *appear* to be ok,
> and all the perl modules pass inspection. I will paste in the troubled
> section below and attach the output files mentioned there.
>
> Thanks in advance,
>
> Michael Porter.
>
>
> ------------------------
> Core Perl Module Setup
> ------------------------
>
> (All verbose information logged in /var/tmp/OME/install/PerlModuleTask.log)
>
> Installing modules
> \_ Configuring [SUCCESS].
> \_ Compiling [SUCCESS].
> \_ Installing [SUCCESS].
>
>
> Errors loading module: /usr/bin/perl /usr/share/perl/5.8/ExtUtils/xsubpp
> -typemap /usr/share/perl/5.8/ExtUtils/typemap cURL_79e0.xs > cURL_79e0.xsc
> && mv cURL_79e0.xsc cURL_79e0.c
> cc -c -I/home/michael/OME -D_REENTRANT -D_GNU_SOURCE -DTHREADS_HAVE_PIDS
> -DDEBIAN -fno-strict-aliasing -pipe -I/usr/local/include -D_LARGEFILE_SOURCE
> -D_FILE_OFFSET_BITS=64 -O2 -DVERSION=\"0.00\" -DXS_VERSION=\"0.00\" -fPIC
> "-I/usr/lib/perl/5.8/CORE" cURL_79e0.c
> cURL_79e0.xs: In function 'new':
> cURL_79e0.xs:26: error: 'CURLOPT_MUTE' undeclared (first use in this
> function)
> cURL_79e0.xs:26: error: (Each undeclared identifier is reported only once
> cURL_79e0.xs:26: error: for each function it appears in.)
> make: *** [cURL_79e0.o] Error 1
>
> A problem was encountered while attempting to compile and install your
> Inline
> C code. The command that failed was:
> make > out.make 2>&1
>
> The build directory was:
> /OME/Inline/build/OME/Util/cURL_79e0
>
> To debug the problem, cd to the build directory, and inspect the output
> files.
>
> at /home/michael/OME/src/perl2/OME/Util/cURL.pm line 162
> Compilation failed in require at
> /home/michael/OME/src/perl2/OME/Install/ApacheConfigTask.pm line 55.
> BEGIN failed--compilation aborted at
> /home/michael/OME/src/perl2/OME/Install/ApacheConfigTask.pm line 55.
> Compilation failed in require at (eval 184) line 3.
>
> at install.pl line 79
> main::run_tasks() called at install.pl line 266
> # Looks like your test died before it could output anything.
>
>
>
>
> --
> Michael Porter
> Wellcome Trust Centre for
> Gene Regulation and Expression
> College of Life Sciences
> University of Dundee
> Dow Street
> Dundee
> United Kingdom
> DD1 5EH
>
> +44(0)1382 388142
> m.porter at dundee.ac.uk
>
> The University of Dundee is a registered Scottish charity, No: SC015096
>
>
>
> #include "EXTERN.h"
> #include "perl.h"
> #include "XSUB.h"
> #include "INLINE.h"
>
> #include <curl/curl.h>
> #include <curl/easy.h>
>
> static size_t my_curl_write(char *buffer, size_t size,
> size_t nitems, void
> *response) {
> sv_catpvn((SV *)(response), buffer, nitems);
> return nitems;
> }
>
> SV *new(char* class)
> {
> SV *obj_ref, *obj;
> CURL *curl = NULL;
>
>
> /* initialize curl */
> curl = curl_easy_init();
> if (! curl)
> croak("Could not initialize cURL");
>
> curl_easy_setopt(curl, CURLOPT_MUTE, 1);
> /* Apache's modsecurity requires a user agent string to be set */
> curl_easy_setopt(curl, CURLOPT_USERAGENT, "OME::Util::cURL");
>
> /* bless it into the class */
> obj_ref = newSV(0);
> sv_setref_pv(obj_ref, class, (void*) curl);
> SvREADONLY_on(obj_ref);
>
> return (obj_ref);
>
> }
>
>
> SV *POST (SV *obj, char *url, SV *aref)
> {
> CURL *curl = (CURL *)( SvIV(SvRV(obj)) );
> SV *response=NULL;
> struct curl_httppost *post=NULL;
> struct curl_httppost *last=NULL;
> HV *param=NULL;
> I32 retlen=0;
> SV *item=NULL, *uploadRef=NULL;
> char *name=NULL, *contents=NULL, *uploadName=NULL, *uploadFile=NULL;
> size_t uploadSize;
> FILE *outfile=NULL;
>
> if (! curl)
> croak("Calling POST on an unblessed reference");
>
>
> /* Check the parameters */
> if (! SvROK(aref) || SvTYPE(SvRV(aref))!= SVt_PVHV)
> croak("aref is not a HASH reference");
> param = (HV*)SvRV(aref);
>
> /* Iterate over the parameter hash */
> hv_iterinit (param);
> item = hv_iternextsv(param, &name, &retlen);
> while (item) {
> if ( strcmp (name,"File") && strcmp (name,"Pixels") &&
> strcmp (name,"__file") ) {
> /* This is not an upload parameter (File or Pixels)*/
> contents = SvPV_nolen(item);
> curl_formadd(&post, &last,
> CURLFORM_COPYNAME, name,
> CURLFORM_COPYCONTENTS, contents,
> CURLFORM_END);
> } else if (! strcmp (name,"__file") ) {
> outfile = fopen (SvPV_nolen(item),"w+");
> if (!outfile) croak("could not open specified output
> file");
> } else if ( SvROK(item) ) {
> /* File or Pixels with a reference means we upload the
> buffer refered to */
> uploadName = name;
> uploadRef = (SV*) SvRV(item);
> } else if ( SvPOK (item) ) {
> /* File or Pixels with a scalar means we upload the file */
> uploadName = name;
> uploadFile = SvPV_nolen(item);
> }
> /* get the next parameter */
> item = hv_iternextsv(param, &name, &retlen);
> }
>
> /* Add the file upload at the end */
> if (uploadFile) {
> curl_formadd(&post, &last,
> CURLFORM_COPYNAME, uploadName,
> CURLFORM_FILE, uploadFile, CURLFORM_END);
> } else if (uploadRef) {
> /* upload buffer */
> curl_formadd(&post, &last,
> CURLFORM_COPYNAME, uploadName,
> CURLFORM_BUFFER, "data",
> CURLFORM_BUFFERPTR, SvPVX(uploadRef),
> CURLFORM_BUFFERLENGTH, SvLEN (uploadRef),
> CURLFORM_END);
>
> }
>
> /* Set the curl form info */
> curl_easy_setopt(curl, CURLOPT_URL, url);
> curl_easy_setopt(curl, CURLOPT_HTTPPOST, post);
>
> /* Make a new SV for our response */
> response = newSVpvf("");
>
> if (! outfile) {
> curl_easy_setopt(curl, CURLOPT_WRITEFUNCTION,
> my_curl_write);
> curl_easy_setopt(curl, CURLOPT_WRITEDATA, response);
> } else {
> curl_easy_setopt(curl, CURLOPT_WRITEFUNCTION, NULL);
> curl_easy_setopt(curl, CURLOPT_WRITEDATA, outfile);
> }
> curl_easy_perform(curl);
>
> /* free the post data */
> curl_formfree(post);
> if (outfile) {
> fclose (outfile);
> outfile = NULL;
> }
> return (response);
> }
>
>
>
> SV *GET (SV *obj, char *url)
> {
> CURL *curl = (CURL *)( SvIV(SvRV(obj)) );
> SV *response=NULL;
>
> if (! curl)
> croak("Calling GET on an unblessed reference");
>
> /* Set the curl options */
> curl_easy_setopt(curl, CURLOPT_URL, url);
> curl_easy_setopt(curl, CURLOPT_HTTPGET, 1);
>
> /* Make a new SV for our response */
> response = newSVpvf("");
>
> curl_easy_setopt(curl, CURLOPT_WRITEFUNCTION, my_curl_write);
> curl_easy_setopt(curl, CURLOPT_WRITEDATA, response);
>
> curl_easy_perform(curl);
>
> return (response);
> }
>
>
> void GET_file (SV *obj, char *url, char *file)
> {
> CURL *curl = (CURL *)( SvIV(SvRV(obj)) );
> SV *response=NULL;
> FILE *outfile=NULL;
>
>
> if (! curl)
> croak("Calling GET_file on an unblessed reference");
>
> if ( file && strlen (file) ) {
> outfile = fopen (file,"w+");
> if (!outfile) croak("could not open specified output file");
> }
>
> /* Set the curl options */
> curl_easy_setopt(curl, CURLOPT_URL, url);
> curl_easy_setopt(curl, CURLOPT_HTTPGET, 1);
>
> curl_easy_setopt(curl, CURLOPT_WRITEFUNCTION, NULL);
> curl_easy_setopt(curl, CURLOPT_WRITEDATA, outfile);
>
> curl_easy_perform(curl);
>
> /* cleanup */
> fclose (outfile);
> outfile = NULL;
> }
>
> SV *status (SV *obj)
> {
> CURL *curl = (CURL *)( SvIV(SvRV(obj)) );
> long response_code;
>
> if (! curl)
> croak("Calling status on an unblessed reference");
>
> curl_easy_getinfo (curl,CURLINFO_HTTP_CODE,&response_code);
> return ( newSViv(response_code) );
> }
>
> void DESTROY (SV *obj)
> {
> CURL *curl = (CURL *)( SvIV(SvRV(obj)) );
> if (curl) {
> curl_easy_cleanup(curl);
> }
> }
>
>
>
> MODULE = OME::Util::cURL_79e0 PACKAGE = OME::Util::cURL
>
> PROTOTYPES: DISABLE
>
>
> SV *
> new (class)
> char * class
>
> SV *
> POST (obj, url, aref)
> SV * obj
> char * url
> SV * aref
>
> SV *
> GET (obj, url)
> SV * obj
> char * url
>
> void
> GET_file (obj, url, file)
> SV * obj
> char * url
> char * file
> PREINIT:
> I32* temp;
> PPCODE:
> temp = PL_markstack_ptr++;
> GET_file(obj, url, file);
> if (PL_markstack_ptr != temp) {
> /* truly void, because dXSARGS not invoked */
> PL_markstack_ptr = temp;
> XSRETURN_EMPTY; /* return empty stack */
> }
> /* must have used dXSARGS; list context implied */
> return; /* assume stack size is correct */
>
> SV *
> status (obj)
> SV * obj
>
> void
> DESTROY (obj)
> SV * obj
> PREINIT:
> I32* temp;
> PPCODE:
> temp = PL_markstack_ptr++;
> DESTROY(obj);
> if (PL_markstack_ptr != temp) {
> /* truly void, because dXSARGS not invoked */
> PL_markstack_ptr = temp;
> XSRETURN_EMPTY; /* return empty stack */
> }
> /* must have used dXSARGS; list context implied */
> return; /* assume stack size is correct */
>
>
> /usr/bin/perl /usr/share/perl/5.8/ExtUtils/xsubpp -typemap
> /usr/share/perl/5.8/ExtUtils/typemap cURL_79e0.xs > cURL_79e0.xsc && mv
> cURL_79e0.xsc cURL_79e0.c
> cc -c -I/home/michael/OME -D_REENTRANT -D_GNU_SOURCE -DTHREADS_HAVE_PIDS
> -DDEBIAN -fno-strict-aliasing -pipe -I/usr/local/include -D_LARGEFILE_SOURCE
> -D_FILE_OFFSET_BITS=64 -O2 -DVERSION=\"0.00\" -DXS_VERSION=\"0.00\" -fPIC
> "-I/usr/lib/perl/5.8/CORE" cURL_79e0.c
> cURL_79e0.xs: In function 'new':
> cURL_79e0.xs:26: error: 'CURLOPT_MUTE' undeclared (first use in this
> function)
> cURL_79e0.xs:26: error: (Each undeclared identifier is reported only once
> cURL_79e0.xs:26: error: for each function it appears in.)
> make: *** [cURL_79e0.o] Error 1
>
> USING PERL CONFIGURE SCRIPT -- 'perl Makefile.PL '
> SUCCESS -- OUTPUT: "You can remove all previous versions of OME with the
> following command:
> perl Makefile.PL uninstall
> --------------------------
> Removing sym-linked DistributedAnalysisEngineCGI.pl and not caring if we
> succeed.
> Performing `make clean` in directory
> /home/michael/OME/src/perl2/OME/Matlab
> make: *** No rule to make target `clean'. Stop.
> Checking if your kit is complete...
> Warning: the following files are missing in your kit:
> OME/Analysis/Engine/Executor.pm
> OME/Analysis/Engine/ForkedPerlExecutor.pm
> OME/Analysis/Engine/install_worker_node.pl
> OME/Analysis/Engine/README.DISTRIBUTED
> OME/Analysis/Engine/SimpleWorkerExecutor.pm
> OME/Analysis/Engine/UnthreadedPerlExecutor.pm
> Please inform the author.
> WARNING: libtiff must be installed !
> Checking if your kit is complete...
> Looks good
> Writing Makefile for OME::Image::Pix
> Checking if your kit is complete...
> Looks good
> Writing Makefile for Repacker
> Writing Makefile for OME
> "
>
> COMPILING MODULE -- 'make'
> SUCCESS -- OUTPUT: "cp OME/Web/DefaultHeaderBuilder.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Web/DefaultHeaderBuilder.pm
> cp OME/Install/CoreSystemTask.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Install/CoreSystemTask.pm
> cp OME/Web/DBObjRender/__OME_AnalysisChain_Link.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Web/DBObjRender/__OME_AnalysisChain_Link.pm
> cp OME/LookupTable/Entry.pm
> /home/michael/OME/src/perl2/blib/lib/OME/LookupTable/Entry.pm
> cp OME/Web/ImageDetailAnnotator.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Web/ImageDetailAnnotator.pm
> cp OME/Web/CG_Search.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Web/CG_Search.pm
> cp OME/ImportEngine/BMPUtils.pm
> /home/michael/OME/src/perl2/blib/lib/OME/ImportEngine/BMPUtils.pm
> cp OME/LSID.pm /home/michael/OME/src/perl2/blib/lib/OME/LSID.pm
> cp OME/ImportExport/ResolveFiles.pm
> /home/michael/OME/src/perl2/blib/lib/OME/ImportExport/ResolveFiles.pm
> cp OME/Matlab/Matlab.xs
> /home/michael/OME/src/perl2/blib/lib/OME/Matlab/Matlab.xs
> cp OME/Image/LocalPixels.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Image/LocalPixels.pm
> cp OME/Tests/ForkedImageImport.pl
> /home/michael/OME/src/perl2/blib/lib/OME/Tests/ForkedImageImport.pl
> cp OME/Analysis/Modules/Classification/WND_CHARM_Trainer.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Analysis/Modules/Classification/WND_CHARM_Trainer.pm
> cp OME/SemanticType/Superclass.pm
> /home/michael/OME/src/perl2/blib/lib/OME/SemanticType/Superclass.pm
> cp OME/Util/Import.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Util/Import.pm
> cp OME/File.pm /home/michael/OME/src/perl2/blib/lib/OME/File.pm
> cp OME/Remote/Facades/AnnotationFacade.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Remote/Facades/AnnotationFacade.pm
> cp OME/ModuleExecution/ParentalOutput.pm
> /home/michael/OME/src/perl2/blib/lib/OME/ModuleExecution/ParentalOutput.pm
> cp OME/Web/Graph/NodeExecutions.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Web/Graph/NodeExecutions.pm
> cp OME/Web/CG_Annotator.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Web/CG_Annotator.pm
> cp OME/Web/ImportModules.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Web/ImportModules.pm
> cp OME/AnalysisChainExecution.pm
> /home/michael/OME/src/perl2/blib/lib/OME/AnalysisChainExecution.pm
> cp OME/SetDB.pm /home/michael/OME/src/perl2/blib/lib/OME/SetDB.pm
> cp OME/Image/Pix/t/tinyTest-LE.raw
> /home/michael/OME/src/perl2/blib/lib/OME/Image/Pix/t/tinyTest-LE.raw
> cp OME/Analysis/Engine/Worker.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Analysis/Engine/Worker.pm
> cp OME/Web/DBObjDetail/__OME_Module.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Web/DBObjDetail/__OME_Module.pm
> cp OME/Install/t/RegressionSuite.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Install/t/RegressionSuite.pm
> cp OME/Web/DBObjRender/__OriginalFile.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Web/DBObjRender/__OriginalFile.pm
> cp OME/Install/InstallationTask.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Install/InstallationTask.pm
> cp OME/Install/PerlModuleTask.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Install/PerlModuleTask.pm
> cp OME/Remote/Facades/ProjectFacade.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Remote/Facades/ProjectFacade.pm
> cp OME/Web/TemplateManager.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Web/TemplateManager.pm
> cp OME/Web/ImportImages.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Web/ImportImages.pm
> cp OME/Dataset.pm /home/michael/OME/src/perl2/blib/lib/OME/Dataset.pm
> cp OME/Remote/SerializerXMLRPC.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Remote/SerializerXMLRPC.pm
> cp OME/Image/Pixels.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Image/Pixels.pm
> cp OME/Web/DBObjCreate/OME_Dataset.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Web/DBObjCreate/OME_Dataset.pm
> cp OME/Web/TableBrowse/FooterBuilder.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Web/TableBrowse/FooterBuilder.pm
> cp OME/Web/Logout.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Web/Logout.pm
> cp OME/Tasks/ImageTasks.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Tasks/ImageTasks.pm
> cp OME/Remote/Apache2/XMLRPC.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Remote/Apache2/XMLRPC.pm
> cp OME/AnalysisChain/Link.pm
> /home/michael/OME/src/perl2/blib/lib/OME/AnalysisChain/Link.pm
> cp OME/Analysis/Handlers/EchoHandler.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Analysis/Handlers/EchoHandler.pm
> cp OME/Install/t/Environment_deleteTree_Test.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Install/t/Environment_deleteTree_Test.pm
> cp OME/Util/Dev/Templates.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Util/Dev/Templates.pm
> cp OME/Web/FindSpots.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Web/FindSpots.pm
> cp OME/Web/ImageAnnotationTable.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Web/ImageAnnotationTable.pm
> cp OME/Analysis/Handlers/MatlabHandler.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Analysis/Handlers/MatlabHandler.pm
> cp OME/Install/Util.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Install/Util.pm
> cp OME/SemanticType/Element.pm
> /home/michael/OME/src/perl2/blib/lib/OME/SemanticType/Element.pm
> cp OME/Web/Util/Category.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Web/Util/Category.pm
> cp OME/Analysis/analyzeCHEX.pl
> /home/michael/OME/src/perl2/blib/lib/OME/Analysis/analyzeCHEX.pl
> cp OME/ImportEngine/Params.pm
> /home/michael/OME/src/perl2/blib/lib/OME/ImportEngine/Params.pm
> cp OME/Remote/DTO/GenericAssembler.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Remote/DTO/GenericAssembler.pm
> cp OME/Util/Dev.pm /home/michael/OME/src/perl2/blib/lib/OME/Util/Dev.pm
> cp OME/Tasks/AEFacade.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Tasks/AEFacade.pm
> cp SVGcatchMsg.pl /home/michael/OME/src/perl2/blib/lib/SVGcatchMsg.pl
> cp OME/Web/DBObjRender/__OME_ModuleExecution.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Web/DBObjRender/__OME_ModuleExecution.pm
> cp OME/Web/DBObjRender/__BayesNetClassifier.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Web/DBObjRender/__BayesNetClassifier.pm
> cp OME/Web/DBObjRender/__Probe.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Web/DBObjRender/__Probe.pm
> cp OME/Util/Data/dbAdmin.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Util/Data/dbAdmin.pm
> cp OME/Web/Authenticated.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Web/Authenticated.pm
> cp OME/ImportEngine/LSMreader.pm
> /home/michael/OME/src/perl2/blib/lib/OME/ImportEngine/LSMreader.pm
> cp OME/Web/GuestMenuBuilder.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Web/GuestMenuBuilder.pm
> cp OME/Install/PreInstallTask.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Install/PreInstallTask.pm
> cp OME/Image/Pix/t/tinyTest-BE.raw
> /home/michael/OME/src/perl2/blib/lib/OME/Image/Pix/t/tinyTest-BE.raw
> cp OME/Util/ExecuteChain.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Util/ExecuteChain.pm
> cp OME/Web/DBObjRender/__OME_SemanticType_Element.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Web/DBObjRender/__OME_SemanticType_Element.pm
> cp OME/ViewerPreferences.pm
> /home/michael/OME/src/perl2/blib/lib/OME/ViewerPreferences.pm
> cp OME/Java/DTOInterface.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Java/DTOInterface.pm
> cp OME/Util/cURL.pm /home/michael/OME/src/perl2/blib/lib/OME/Util/cURL.pm
> cp OME/Web/TableBrowse.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Web/TableBrowse.pm
> cp OME/Web/GeneStageAnnotator.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Web/GeneStageAnnotator.pm
> cp OME/Tests/ExportSession.pl
> /home/michael/OME/src/perl2/blib/lib/OME/Tests/ExportSession.pl
> cp OME/Web/TaskProgress.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Web/TaskProgress.pm
> cp OME/ImportEngine/ImportEngine.pm
> /home/michael/OME/src/perl2/blib/lib/OME/ImportEngine/ImportEngine.pm
> cp OME/Analysis/Handlers/DefaultLoopHandler.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Analysis/Handlers/DefaultLoopHandler.pm
> cp OME/Util/Top.pm /home/michael/OME/src/perl2/blib/lib/OME/Util/Top.pm
> cp OME/Web/ImageAnnotationDetail.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Web/ImageAnnotationDetail.pm
> cp OME/Module/FormalOutput.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Module/FormalOutput.pm
> cp OME/Web/DBObjRender/__Fluorofor.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Web/DBObjRender/__Fluorofor.pm
> cp OME/Web/ExecuteChain.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Web/ExecuteChain.pm
> cp OME/Web/RunClassifier.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Web/RunClassifier.pm
> cp OME/UserState.pm /home/michael/OME/src/perl2/blib/lib/OME/UserState.pm
> cp OME/ImportExport/HierarchyExport.pm
> /home/michael/OME/src/perl2/blib/lib/OME/ImportExport/HierarchyExport.pm
> cp OME/ImportExport/HierarchyImport.pm
> /home/michael/OME/src/perl2/blib/lib/OME/ImportExport/HierarchyImport.pm
> cp OME/Tasks/ClassifierTasks.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Tasks/ClassifierTasks.pm
> cp OME/Web/XMLFileExport.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Web/XMLFileExport.pm
> cp OME/Util/Dev/FinishExecute.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Util/Dev/FinishExecute.pm
> cp OME/Util/Admin/Configure.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Util/Admin/Configure.pm
> cp OME/Web/DBObjDetail/__OME_Dataset.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Web/DBObjDetail/__OME_Dataset.pm
> cp OME/Analysis/Modules/Classification/SignatureStitcher.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Analysis/Modules/Classification/SignatureStitcher.pm
> cp OME/Web/ImageAnnotationBrowser.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Web/ImageAnnotationBrowser.pm
> cp OME/ImportExport/DataHistoryImport.pm
> /home/michael/OME/src/perl2/blib/lib/OME/ImportExport/DataHistoryImport.pm
> cp OME/ImportExport/Repacker/MANIFEST
> /home/michael/OME/src/perl2/blib/lib/OME/ImportExport/Repacker/MANIFEST
> cp OME/Image/Pix/libpix.c
> /home/michael/OME/src/perl2/blib/lib/OME/Image/Pix/libpix.c
> cp OME/ImportEngine/BMPreader.pm
> /home/michael/OME/src/perl2/blib/lib/OME/ImportEngine/BMPreader.pm
> cp OME/Web/DBObjRender/__Objective.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Web/DBObjRender/__Objective.pm
> cp OME/ImportExport/ModuleImport.pm
> /home/michael/OME/src/perl2/blib/lib/OME/ImportExport/ModuleImport.pm
> cp OME/Analysis/Modules/Tracking/FindSpots.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Analysis/Modules/Tracking/FindSpots.pm
> cp OME/Util/Dev/Classifier.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Util/Dev/Classifier.pm
> cp OME/Analysis/Modules/Tests/PassThrough.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Analysis/Modules/Tests/PassThrough.pm
> cp OME/Web/STdoc.pm /home/michael/OME/src/perl2/blib/lib/OME/Web/STdoc.pm
> cp OME/Util/Commands.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Util/Commands.pm
> cp OME/Web/Wizards/ImportAndAnnotateImages.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Web/Wizards/ImportAndAnnotateImages.pm
> cp OME/Web/DBObjRender/__OME_AnalysisChainExecution_NodeExecution.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Web/DBObjRender/__OME_AnalysisChainExecution_NodeExecution.pm
> cp OME/Analysis/Modules/PPM/Typecast.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Analysis/Modules/PPM/Typecast.pm
> cp OME/Web/GetGraphics.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Web/GetGraphics.pm
> cp OME/Feature.pm /home/michael/OME/src/perl2/blib/lib/OME/Feature.pm
> cp OME/Matlab/Compiled.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Matlab/Compiled.pm
> cp OME/Install/MaintenanceTask.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Install/MaintenanceTask.pm
> cp OME/Web/SpreadsheetImporterPrompt.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Web/SpreadsheetImporterPrompt.pm
> cp OME/Web/AccessManager.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Web/AccessManager.pm
> cp OME/Web/DatasetOnGoogleMaps.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Web/DatasetOnGoogleMaps.pm
> cp OME/Analysis/Modules/Tracking/TrackSpots.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Analysis/Modules/Tracking/TrackSpots.pm
> cp OME/Web/DBObjDetail/__OME_ModuleExecution.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Web/DBObjDetail/__OME_ModuleExecution.pm
> cp OME/Analysis/Modules/Histogram/PlaneHistogram.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Analysis/Modules/Histogram/PlaneHistogram.pm
> cp OME/Tasks/ChainManager.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Tasks/ChainManager.pm
> cp OME/Tasks/AnnotationManager.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Tasks/AnnotationManager.pm
> cp OME/Analysis/Modules/PPM/FourierTransform.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Analysis/Modules/PPM/FourierTransform.pm
> cp OME/Image/DatasetMap.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Image/DatasetMap.pm
> cp OME/Web/DBObjRender/__OME_SemanticType.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Web/DBObjRender/__OME_SemanticType.pm
> cp OME/Analysis/Handlers/NoopHandler.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Analysis/Handlers/NoopHandler.pm
> cp OME/Fork.pm /home/michael/OME/src/perl2/blib/lib/OME/Fork.pm
> cp OME/Module/Category.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Module/Category.pm
> cp OME/ImportExport/DataHistoryExport.pm
> /home/michael/OME/src/perl2/blib/lib/OME/ImportExport/DataHistoryExport.pm
> cp OME/Tasks/PixelsManager.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Tasks/PixelsManager.pm
> cp OME/Tasks/CategoryManager.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Tasks/CategoryManager.pm
> cp OME/Analysis/Modules/PPM/Typecast2DerivedPixels.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Analysis/Modules/PPM/Typecast2DerivedPixels.pm
> cp OME/Analysis/Modules/Tests/FauxSignature.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Analysis/Modules/Tests/FauxSignature.pm
> cp OME/ImportEngine/GELreader.pm
> /home/michael/OME/src/perl2/blib/lib/OME/ImportEngine/GELreader.pm
> cp OME/Web.pm /home/michael/OME/src/perl2/blib/lib/OME/Web.pm
> cp OME/ImportEngine/MetamorphHTDFormat.pm
> /home/michael/OME/src/perl2/blib/lib/OME/ImportEngine/MetamorphHTDFormat.pm
> cp OME/Web/DBObjRender/__OME_AnalysisChainExecution.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Web/DBObjRender/__OME_AnalysisChainExecution.pm
> cp OME/Analysis/Engine/FeatureHierarchy.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Analysis/Engine/FeatureHierarchy.pm
> cp OME/Web/DBObjRender.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Web/DBObjRender.pm
> cp OME/DBConnection.pm
> /home/michael/OME/src/perl2/blib/lib/OME/DBConnection.pm
> cp OME/Install/LibraryTask.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Install/LibraryTask.pm
> cp OME/Configuration/Variable.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Configuration/Variable.pm
> cp omeapi.pod /home/michael/OME/src/perl2/blib/lib/omeapi.pod
> cp OME/Web/Login.pm /home/michael/OME/src/perl2/blib/lib/OME/Web/Login.pm
> cp OME/Tasks/HistoryManager.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Tasks/HistoryManager.pm
> cp OME/Util/Admin/GroupAdmin.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Util/Admin/GroupAdmin.pm
> cp OME/Remote/DTO/ProjectAssembler.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Remote/DTO/ProjectAssembler.pm
> cp OME/AnalysisChainExecutionUserInputs.pm
> /home/michael/OME/src/perl2/blib/lib/OME/AnalysisChainExecutionUserInputs.pm
> cp OME/Image/Pix/t/test.t
> /home/michael/OME/src/perl2/blib/lib/OME/Image/Pix/t/test.t
> cp OME/Tasks/LSIDManager.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Tasks/LSIDManager.pm
> cp OME/Tasks/AttributeManager.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Tasks/AttributeManager.pm
> cp OME/Analysis/Modules/Tests/DatasetSignature.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Analysis/Modules/Tests/DatasetSignature.pm
> cp OME/Web/DBObjRender/__OME_AnalysisChain_Node.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Web/DBObjRender/__OME_AnalysisChain_Node.pm
> cp OME/Image/Pix/Changes
> /home/michael/OME/src/perl2/blib/lib/OME/Image/Pix/Changes
> cp OME/SemanticType/BootstrapRepository.pm
> /home/michael/OME/src/perl2/blib/lib/OME/SemanticType/BootstrapRepository.pm
> cp OME/Analysis/Modules/ImageClassifier/ComputeFeatures.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Analysis/Modules/ImageClassifier/ComputeFeatures.pm
> cp OME/Web/DBObjRender/__Pixels.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Web/DBObjRender/__Pixels.pm
> cp OME/Web/Util/Dataset.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Web/Util/Dataset.pm
> cp OME/Web/CG_Display.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Web/CG_Display.pm
> cp OME/ImportEngine/OMETIFFreader.pm
> /home/michael/OME/src/perl2/blib/lib/OME/ImportEngine/OMETIFFreader.pm
> cp OME/ModuleExecution.pm
> /home/michael/OME/src/perl2/blib/lib/OME/ModuleExecution.pm
> cp OME/Analysis/Modules/Histogram/StackHistogram.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Analysis/Modules/Histogram/StackHistogram.pm
> cp OME/Web/SaveViewerSettings.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Web/SaveViewerSettings.pm
> cp OME/SemanticType/Element/Label.pm
> /home/michael/OME/src/perl2/blib/lib/OME/SemanticType/Element/Label.pm
> cp OME/Matlab/Matlab.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Matlab/Matlab.pm
> cp OME/Install/t/Environment_copyTree_Test1.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Install/t/Environment_copyTree_Test1.pm
> cp OME/Remote/Prototypes.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Remote/Prototypes.pm
> cp OME/Tasks/ModuleTasks.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Tasks/ModuleTasks.pm
> cp OME/Remote/Apache1_99/Transport.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Remote/Apache1_99/Transport.pm
> cp OME/Analysis/Modules/Tests/FindBounds.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Analysis/Modules/Tests/FindBounds.pm
> cp OME/Install/t/Environment_scanDir_Test.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Install/t/Environment_scanDir_Test.pm
> cp OME/Tasks/OMEXMLImportExport.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Tasks/OMEXMLImportExport.pm
> cp OME/Remote/Facades/XMLUtils.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Remote/Facades/XMLUtils.pm
> cp OME/Util/Annotate/SpreadsheetWriter.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Util/Annotate/SpreadsheetWriter.pm
> cp OME/Install/LDAPConfigTask.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Install/LDAPConfigTask.pm
> cp OME/ImportExport/ChainExport.pm
> /home/michael/OME/src/perl2/blib/lib/OME/ImportExport/ChainExport.pm
> cp OME/Remote/Apache/XMLRPC.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Remote/Apache/XMLRPC.pm
> cp OME/Tests/SOAP-2.pl
> /home/michael/OME/src/perl2/blib/lib/OME/Tests/SOAP-2.pl
> cp OME/Task.pm /home/michael/OME/src/perl2/blib/lib/OME/Task.pm
> cp OME/ImportEngine/STKreader.pm
> /home/michael/OME/src/perl2/blib/lib/OME/ImportEngine/STKreader.pm
> cp OME/AnalysisChainExecution/NodeExecution.pm
> /home/michael/OME/src/perl2/blib/lib/OME/AnalysisChainExecution/NodeExecution.pm
> cp OME/ImportExport/Repacker/Repacker.xs
> /home/michael/OME/src/perl2/blib/lib/OME/ImportExport/Repacker/Repacker.xs
> cp OME/Web/DBObjDetail/__OME_Image.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Web/DBObjDetail/__OME_Image.pm
> cp showENV.pl /home/michael/OME/src/perl2/blib/lib/showENV.pl
> cp OME/Remote/Apache1_99.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Remote/Apache1_99.pm
> cp OME/Web/VisBio.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Web/VisBio.pm
> cp OME/Web/CG_ConstructTemplate.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Web/CG_ConstructTemplate.pm
> cp OME/Web/Search.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Web/Search.pm
> cp OME/Web/DefaultFooterBuilder.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Web/DefaultFooterBuilder.pm
> cp OME/Web/TableBrowse/HeaderBuilder.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Web/TableBrowse/HeaderBuilder.pm
> cp OME/ImportExport/Repacker/README
> /home/michael/OME/src/perl2/blib/lib/OME/ImportExport/Repacker/README
> cp OME/Web/DBObjRender/__OME_Image.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Web/DBObjRender/__OME_Image.pm
> cp OME/Tasks/ImportManager.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Tasks/ImportManager.pm
> cp OME/Analysis/Modules/Statistics/StackStatistics.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Analysis/Modules/Statistics/StackStatistics.pm
> cp OME/Web/DBObjRender/__SamplePreparation.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Web/DBObjRender/__SamplePreparation.pm
> cp OME/Web/Ping.pm /home/michael/OME/src/perl2/blib/lib/OME/Web/Ping.pm
> cp OME/Tasks/ProjectManager.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Tasks/ProjectManager.pm
> cp OME/Web/Graph/ChainExecution.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Web/Graph/ChainExecution.pm
> cp OME/Remote/Facades/ConfigFacade.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Remote/Facades/ConfigFacade.pm
> cp OME/ImportEngine/BioradReader.pm
> /home/michael/OME/src/perl2/blib/lib/OME/ImportEngine/BioradReader.pm
> cp OME/Web/UploadImage.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Web/UploadImage.pm
> cp OME/ImportExport/SemanticTypeImport.pm
> /home/michael/OME/src/perl2/blib/lib/OME/ImportExport/SemanticTypeImport.pm
> cp OME/Tasks/ImageManager.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Tasks/ImageManager.pm
> cp OME/Web/DBObjDetail/__CategoryGroup.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Web/DBObjDetail/__CategoryGroup.pm
> cp OME/Analysis/Modules/ROI/ImageROI.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Analysis/Modules/ROI/ImageROI.pm
> cp OME/Tasks/MultipleSTAnnotationManager.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Tasks/MultipleSTAnnotationManager.pm
> cp OME/Web/Search/Experimenter.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Web/Search/Experimenter.pm
> cp OME/ImportExport/ChainImport.pm
> /home/michael/OME/src/perl2/blib/lib/OME/ImportExport/ChainImport.pm
> cp OME/Web/DBObjCreate.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Web/DBObjCreate.pm
> cp OME/Web/DefaultMenuBuilder.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Web/DefaultMenuBuilder.pm
> cp OME/Web/TrainClassifier.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Web/TrainClassifier.pm
> cp OME/ModuleExecution/SemanticTypeOutput.pm
> /home/michael/OME/src/perl2/blib/lib/OME/ModuleExecution/SemanticTypeOutput.pm
> cp OME/Analysis/Handlers/CLIHandler.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Analysis/Handlers/CLIHandler.pm
> cp OME/Image/Pix/typemap
> /home/michael/OME/src/perl2/blib/lib/OME/Image/Pix/typemap
> cp OME/LookupTable.pm
> /home/michael/OME/src/perl2/blib/lib/OME/LookupTable.pm
> cp OME/Analysis/Engine/DistributedAnalysisEngineClient.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Analysis/Engine/DistributedAnalysisEngineClient.pm
> cp OME/Util/Annotate.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Util/Annotate.pm
> cp OME/SemanticType/BootstrapGroup.pm
> /home/michael/OME/src/perl2/blib/lib/OME/SemanticType/BootstrapGroup.pm
> cp OME/Configuration.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Configuration.pm
> cp OME/Factory.pm /home/michael/OME/src/perl2/blib/lib/OME/Factory.pm
> cp OME/Analysis/Modules/PPM/Gradient.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Analysis/Modules/PPM/Gradient.pm
> cp OME/SemanticType/BootstrapExperimenterGroup.pm
> /home/michael/OME/src/perl2/blib/lib/OME/SemanticType/BootstrapExperimenterGroup.pm
> cp OME/ImportExport/SemanticTypeExport.pm
> /home/michael/OME/src/perl2/blib/lib/OME/ImportExport/SemanticTypeExport.pm
> cp OME/ImportEngine/AbstractFormat.pm
> /home/michael/OME/src/perl2/blib/lib/OME/ImportEngine/AbstractFormat.pm
> cp OME/Matlab/Makefile.PL
> /home/michael/OME/src/perl2/blib/lib/OME/Matlab/Makefile.PL
> cp OME/AnalysisChain/Node.pm
> /home/michael/OME/src/perl2/blib/lib/OME/AnalysisChain/Node.pm
> cp OME/ImportEngine/DICOM.pm
> /home/michael/OME/src/perl2/blib/lib/OME/ImportEngine/DICOM.pm
> cp OME/Web/DBObjRender/__ExternalLink.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Web/DBObjRender/__ExternalLink.pm
> cp OME/Web/DBObjRender/__Instrument.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Web/DBObjRender/__Instrument.pm
> cp OME/Analysis/Modules/ROI/Image2DTiledROIs.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Analysis/Modules/ROI/Image2DTiledROIs.pm
> cp OME/SemanticType.pm
> /home/michael/OME/src/perl2/blib/lib/OME/SemanticType.pm
> cp OME/Web/DBObjRender/__OME_Task.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Web/DBObjRender/__OME_Task.pm
> cp OME/Remote/Apache2/Transport.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Remote/Apache2/Transport.pm
> cp OME/Remote.pm /home/michael/OME/src/perl2/blib/lib/OME/Remote.pm
> cp OME/Tasks/NotificationManager.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Tasks/NotificationManager.pm
> cp OME/ImportExport/Repacker/Makefile.PL
> /home/michael/OME/src/perl2/blib/lib/OME/ImportExport/Repacker/Makefile.PL
> cp OME/Matlab/test.pl
> /home/michael/OME/src/perl2/blib/lib/OME/Matlab/test.pl
> cp OME/Remote/Apache/HTTPProxy.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Remote/Apache/HTTPProxy.pm
> cp OME/Remote/Facades/DatasetFacade.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Remote/Facades/DatasetFacade.pm
> cp OME/Java/SemanticTypeInterface.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Java/SemanticTypeInterface.pm
> cp OME/Install/ApacheConfigTask.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Install/ApacheConfigTask.pm
> cp OME/Web/DBObjRender/__OME_DataTable_Column.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Web/DBObjRender/__OME_DataTable_Column.pm
> cp OME/Tasks/DatasetManager.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Tasks/DatasetManager.pm
> cp OME/Install/t/Environment_copyTree_Test2.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Install/t/Environment_copyTree_Test2.pm
> cp OME/Web/Home.pm /home/michael/OME/src/perl2/blib/lib/OME/Web/Home.pm
> cp OME/Matlab/MANIFEST
> /home/michael/OME/src/perl2/blib/lib/OME/Matlab/MANIFEST
> cp OME/ImportEngine/XMLreader.pm
> /home/michael/OME/src/perl2/blib/lib/OME/ImportEngine/XMLreader.pm
> cp OME/Util/Dev/Lint.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Util/Dev/Lint.pm
> cp OME/Database/Delegate.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Database/Delegate.pm
> cp OME/Web/Search/OME_ModuleExecution.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Web/Search/OME_ModuleExecution.pm
> cp OME/DataTable/Column.pm
> /home/michael/OME/src/perl2/blib/lib/OME/DataTable/Column.pm
> cp OME/ImportExport/Repacker/Repacker.pm
> /home/michael/OME/src/perl2/blib/lib/OME/ImportExport/Repacker/Repacker.pm
> cp OME/ModuleExecution/VirtualMEXMap.pm
> /home/michael/OME/src/perl2/blib/lib/OME/ModuleExecution/VirtualMEXMap.pm
> cp OME/Util/Admin/Uninstall.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Util/Admin/Uninstall.pm
> cp OME/Analysis/Modules/Tests/ImageSignature.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Analysis/Modules/Tests/ImageSignature.pm
> cp OME/Install/MatlabTask.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Install/MatlabTask.pm
> cp OME/ImportExport/Repacker/Changes
> /home/michael/OME/src/perl2/blib/lib/OME/ImportExport/Repacker/Changes
> cp OME/Analysis/Modules/Statistics/PlaneStatistics.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Analysis/Modules/Statistics/PlaneStatistics.pm
> cp OME/ImportExport/Repacker/test.pl
> /home/michael/OME/src/perl2/blib/lib/OME/ImportExport/Repacker/test.pl
> cp OME/Web/MultiObjCreate.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Web/MultiObjCreate.pm
> cp OME/Remote/Facades/ChainRetrievalFacade.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Remote/Facades/ChainRetrievalFacade.pm
> cp OME/Image.pm /home/michael/OME/src/perl2/blib/lib/OME/Image.pm
> cp OME/Tasks/OMEExport.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Tasks/OMEExport.pm
> cp OME/Web/ImportFiles.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Web/ImportFiles.pm
> cp OME/Install/Environment.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Install/Environment.pm
> cp OME/ImportEngine/DICOMconstants.pm
> /home/michael/OME/src/perl2/blib/lib/OME/ImportEngine/DICOMconstants.pm
> cp OME/Remote/Facades/ImportFacade.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Remote/Facades/ImportFacade.pm
> cp OME/Remote/Facades/SessionFacade.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Remote/Facades/SessionFacade.pm
> cp OME/Install/t/Environment_copyTree_Test3.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Install/t/Environment_copyTree_Test3.pm
> cp OME/Module.pm /home/michael/OME/src/perl2/blib/lib/OME/Module.pm
> cp OME/AnalysisChain.pm
> /home/michael/OME/src/perl2/blib/lib/OME/AnalysisChain.pm
> cp OME/Remote/DTO.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Remote/DTO.pm
> cp OME/Web/GuestHeaderBuilder.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Web/GuestHeaderBuilder.pm
> cp OME/Web/Search/OME_Project.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Web/Search/OME_Project.pm
> cp OME/ImportEngine/BioFormats.pm
> /home/michael/OME/src/perl2/blib/lib/OME/ImportEngine/BioFormats.pm
> cp OME/Project.pm /home/michael/OME/src/perl2/blib/lib/OME/Project.pm
> cp OME/Util/Annotate/SpreadsheetReader.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Util/Annotate/SpreadsheetReader.pm
> cp OME/Install/CoreDatabaseTablesTask.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Install/CoreDatabaseTablesTask.pm
> cp OME/Image/Pix/libpix.h
> /home/michael/OME/src/perl2/blib/lib/OME/Image/Pix/libpix.h
> cp OME/Image/Pix/MANIFEST
> /home/michael/OME/src/perl2/blib/lib/OME/Image/Pix/MANIFEST
> cp OME/Remote/Apache2/HTTPProxy.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Remote/Apache2/HTTPProxy.pm
> cp OME/ImportEngine/TIFFreader.pm
> /home/michael/OME/src/perl2/blib/lib/OME/ImportEngine/TIFFreader.pm
> cp OME/Matlab/CompilationREADME
> /home/michael/OME/src/perl2/blib/lib/OME/Matlab/CompilationREADME
> cp OME/SemanticType/Label.pm
> /home/michael/OME/src/perl2/blib/lib/OME/SemanticType/Label.pm
> cp OME/Web/DBObjRender/__DevelopmentalStage.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Web/DBObjRender/__DevelopmentalStage.pm
> cp OME/Matlab/compileDynamicLibraries.pl
> /home/michael/OME/src/perl2/blib/lib/OME/Matlab/compileDynamicLibraries.pl
> cp OME/Web/DBObjCreate/Category.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Web/DBObjCreate/Category.pm
> cp OME/Analysis/Engine/Job.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Analysis/Engine/Job.pm
> cp OME/Analysis/Engine/DistributedAnalysisEngineCGI.pl
> /home/michael/OME/src/perl2/blib/lib/OME/Analysis/Engine/DistributedAnalysisEngineCGI.pl
> cp OME/Tests/XMLRPC.pl
> /home/michael/OME/src/perl2/blib/lib/OME/Tests/XMLRPC.pl
> cp OME/Remote/Apache/Transport.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Remote/Apache/Transport.pm
> cp OME/Install/Terminal.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Install/Terminal.pm
> cp serve.pl /home/michael/OME/src/perl2/blib/lib/serve.pl
> cp OME/Tasks/SemanticTypeManager.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Tasks/SemanticTypeManager.pm
> cp OME/Analysis/Engine.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Analysis/Engine.pm
> cp OME/Analysis/Modules/Classification/ML_BayesNet_Trainer.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Analysis/Modules/Classification/ML_BayesNet_Trainer.pm
> cp OME/Remote/Facades/AnalysisFacade.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Remote/Facades/AnalysisFacade.pm
> cp OME/Tests/LDAPtest.pl
> /home/michael/OME/src/perl2/blib/lib/OME/Tests/LDAPtest.pl
> cp OME/DataTable.pm /home/michael/OME/src/perl2/blib/lib/OME/DataTable.pm
> cp OME/Project/DatasetMap.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Project/DatasetMap.pm
> cp OME/Util/Annotate/AnnotationWizards.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Util/Annotate/AnnotationWizards.pm
> cp OME/Util/Data/Delete.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Util/Data/Delete.pm
> cp OME/Web/DBObjRender/__Experimenter.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Web/DBObjRender/__Experimenter.pm
> cp OME/SessionManager.pm
> /home/michael/OME/src/perl2/blib/lib/OME/SessionManager.pm
> cp OME/Analysis/Modules/ROI/Image2DROIs.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Analysis/Modules/ROI/Image2DROIs.pm
> cp OME/Analysis/Modules/Classification/WND_CHARM_Prediction.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Analysis/Modules/Classification/WND_CHARM_Prediction.pm
> cp OME/Util/OMECommander.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Util/OMECommander.pm
> cp OME/Remote/Apache2.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Remote/Apache2.pm
> cp OME/Tasks/OMEImport.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Tasks/OMEImport.pm
> cp OME/Remote/Facades/HistoryFacade.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Remote/Facades/HistoryFacade.pm
> cp OME/ImportEngine/DICOMreader.pm
> /home/michael/OME/src/perl2/blib/lib/OME/ImportEngine/DICOMreader.pm
> cp OME/Web/DBObjDetail.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Web/DBObjDetail.pm
> cp OME/Analysis/Engine/NonblockingSlaveWorkerCGI.pl
> /home/michael/OME/src/perl2/blib/lib/OME/Analysis/Engine/NonblockingSlaveWorkerCGI.pl
> cp OME/Web/DBObjRender/__OME_DataTable.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Web/DBObjRender/__OME_DataTable.pm
> cp OME/Tests/SOAP.pl
> /home/michael/OME/src/perl2/blib/lib/OME/Tests/SOAP.pl
> cp OME/Remote/Apache.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Remote/Apache.pm
> cp OME/Image/Server.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Image/Server.pm
> cp OME/Analysis/Modules/Tests/FindRatio.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Analysis/Modules/Tests/FindRatio.pm
> cp OME/Web/GuestFooterBuilder.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Web/GuestFooterBuilder.pm
> cp OME/Web/DBObjTable.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Web/DBObjTable.pm
> cp OME/Image/Pix/Pix.xs
> /home/michael/OME/src/perl2/blib/lib/OME/Image/Pix/Pix.xs
> cp OME/Analysis/Analysis_System_Notes.txt
> /home/michael/OME/src/perl2/blib/lib/OME/Analysis/Analysis_System_Notes.txt
> cp OME/Matlab/writeLibraryPackage.pl
> /home/michael/OME/src/perl2/blib/lib/OME/Matlab/writeLibraryPackage.pl
> cp OME/Web/MultiObjCreate/ExperimentProtocol.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Web/MultiObjCreate/ExperimentProtocol.pm
> cp OME/Analysis/Modules/Classification/ML_BayesNet_Classifier.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Analysis/Modules/Classification/ML_BayesNet_Classifier.pm
> cp OME/Matlab/Changes
> /home/michael/OME/src/perl2/blib/lib/OME/Matlab/Changes
> cp OME/Util/Dev/wnd.pm /home/michael/OME/src/perl2/blib/lib/OME/Util/Dev/
> wnd.pm
> cp OME/Util/Admin/UserAdmin.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Util/Admin/UserAdmin.pm
> cp OME/Java/omejava /home/michael/OME/src/perl2/blib/lib/OME/Java/omejava
> cp OME/Web/DBObjRender/__Husbandry.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Web/DBObjRender/__Husbandry.pm
> cp OME/Image/Server/Pixels.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Image/Server/Pixels.pm
> cp OME/Tests/InteractiveSOAP.pl
> /home/michael/OME/src/perl2/blib/lib/OME/Tests/InteractiveSOAP.pl
> cp OME/ModuleExecution/ActualInput.pm
> /home/michael/OME/src/perl2/blib/lib/OME/ModuleExecution/ActualInput.pm
> cp OME/Web/DBObjRender/__Category.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Web/DBObjRender/__Category.pm
> cp OME/LocalFile.pm /home/michael/OME/src/perl2/blib/lib/OME/LocalFile.pm
> cp OME/Remote/RPC2.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Remote/RPC2.pm
> cp OME/Tasks/ModuleExecutionManager.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Tasks/ModuleExecutionManager.pm
> cp OME/Matlab/typemap
> /home/michael/OME/src/perl2/blib/lib/OME/Matlab/typemap
> cp OME/SemanticType/BootstrapExperimenter.pm
> /home/michael/OME/src/perl2/blib/lib/OME/SemanticType/BootstrapExperimenter.pm
> cp OME/Web/DBObjRender/__OME_Dataset.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Web/DBObjRender/__OME_Dataset.pm
> cp OME/ImportEngine/TIFFUtils.pm
> /home/michael/OME/src/perl2/blib/lib/OME/ImportEngine/TIFFUtils.pm
> cp OME/Web/FileTable.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Web/FileTable.pm
> cp OME/Image/Pix/t/tinyTest.d3d.dv
> /home/michael/OME/src/perl2/blib/lib/OME/Image/Pix/t/tinyTest.d3d.dv
> cp OME/Util/Admin/OMEAdmin.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Util/Admin/OMEAdmin.pm
> cp LogService.pl /home/michael/OME/src/perl2/blib/lib/LogService.pl
> cp OME/Remote/Facades/GenericFacade.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Remote/Facades/GenericFacade.pm
> cp OME.pm /home/michael/OME/src/perl2/blib/lib/OME.pm
> cp OME/Analysis/Handler.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Analysis/Handler.pm
> cp OME/Module/FormalInput.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Module/FormalInput.pm
> cp OME/Remote/Facades/ModuleExecutionFacade.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Remote/Facades/ModuleExecutionFacade.pm
> cp OME/Web/DBObjDetail/__OME_Project.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Web/DBObjDetail/__OME_Project.pm
> cp omemodules.pod /home/michael/OME/src/perl2/blib/lib/omemodules.pod
> cp OME-startup.pl /home/michael/OME/src/perl2/blib/lib/OME-startup.pl
> cp OME/Remote/Facade.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Remote/Facade.pm
> cp OME/Session.pm /home/michael/OME/src/perl2/blib/lib/OME/Session.pm
> cp OME/Remote/Apache1_99/HTTPProxy.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Remote/Apache1_99/HTTPProxy.pm
> cp OME/Database/PostgresDelegate.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Database/PostgresDelegate.pm
> cp OME/Remote/DeserializerXMLRPC.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Remote/DeserializerXMLRPC.pm
> cp OME/Image/Pix/Pix.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Image/Pix/Pix.pm
> cp OME/Util/Dev/ChainStats.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Util/Dev/ChainStats.pm
> cp newdevelopers.pod
> /home/michael/OME/src/perl2/blib/lib/newdevelopers.pod
> cp OME/DBObject.pm /home/michael/OME/src/perl2/blib/lib/OME/DBObject.pm
> cp OME/Remote/Facades/ModuleRetrievalFacade.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Remote/Facades/ModuleRetrievalFacade.pm
> cp OME/Util/Data/Export.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Util/Data/Export.pm
> cp OME/Web/DBObjCreate/OME_Project.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Web/DBObjCreate/OME_Project.pm
> cp OME/Image/Server/File.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Image/Server/File.pm
> cp OME/ImportEngine/DVreader.pm
> /home/michael/OME/src/perl2/blib/lib/OME/ImportEngine/DVreader.pm
> cp OME/Web/DBObjDetail/__Category.pm
> /home/michael/OME/src/perl2/blib/lib/OME/Web/DBObjDetail/__Category.pm
> cp OME/Image/Pix/Makefile.PL
> /home/michael/OME/src/perl2/blib/lib/OME/Image/Pix/Makefile.PL
> make[1]: Entering directory `/home/michael/OME/src/perl2/OME/Image/Pix'
> cp Pix.pm /home/michael/OME/src/perl2/blib/lib/OME/Image/Pix.pm
> /usr/bin/perl /usr/share/perl/5.8.8/ExtUtils/xsubpp -typemap
> /usr/share/perl/5.8/ExtUtils/typemap -typemap typemap Pix.xs > Pix.xsc &&
> mv Pix.xsc Pix.c
> cc -c -I/sw/include -D_REENTRANT -D_GNU_SOURCE -DTHREADS_HAVE_PIDS
> -DDEBIAN -fno-strict-aliasing -pipe -I/usr/local/include -D_LARGEFILE_SOURCE
> -D_FILE_OFFSET_BITS=64 -O2 -DVERSION=\"2.007\" -DXS_VERSION=\"2.007\"
> -fPIC "-I/usr/lib/perl/5.8/CORE" Pix.c
> cc -c -I/sw/include -D_REENTRANT -D_GNU_SOURCE -DTHREADS_HAVE_PIDS
> -DDEBIAN -fno-strict-aliasing -pipe -I/usr/local/include -D_LARGEFILE_SOURCE
> -D_FILE_OFFSET_BITS=64 -O2 -DVERSION=\"2.007\" -DXS_VERSION=\"2.007\"
> -fPIC "-I/usr/lib/perl/5.8/CORE" libpix.c
> Running Mkbootstrap for OME::Image::Pix ()
> chmod 644 Pix.bs
> rm -f /home/michael/OME/src/perl2/blib/arch/auto/OME/Image/Pix/Pix.so
> cc -shared -L/usr/local/lib Pix.o libpix.o -o
> /home/michael/OME/src/perl2/blib/arch/auto/OME/Image/Pix/Pix.so \
> -L/usr/local/lib -ltiff \
>
> chmod 755 /home/michael/OME/src/perl2/blib/arch/auto/OME/Image/Pix/Pix.so
> cp Pix.bs /home/michael/OME/src/perl2/blib/arch/auto/OME/Image/Pix/Pix.bs
> chmod 644 /home/michael/OME/src/perl2/blib/arch/auto/OME/Image/Pix/Pix.bs
> Manifying /home/michael/OME/src/perl2/blib/man3/OME::Image::Pix.3pm
> make[1]: Leaving directory `/home/michael/OME/src/perl2/OME/Image/Pix'
> make[1]: Entering directory
> `/home/michael/OME/src/perl2/OME/ImportExport/Repacker'
> cp Repacker.pm /home/michael/OME/src/perl2/blib/lib/Repacker.pm
> /usr/bin/perl /usr/share/perl/5.8.8/ExtUtils/xsubpp -typemap
> /usr/share/perl/5.8/ExtUtils/typemap Repacker.xs > Repacker.xsc && mv
> Repacker.xsc Repacker.c
> cc -c -D_REENTRANT -D_GNU_SOURCE -DTHREADS_HAVE_PIDS -DDEBIAN
> -fno-strict-aliasing -pipe -I/usr/local/include -D_LARGEFILE_SOURCE
> -D_FILE_OFFSET_BITS=64 -O2 -DVERSION=\"2.007\" -DXS_VERSION=\"2.007\"
> -fPIC "-I/usr/lib/perl/5.8/CORE" Repacker.c
> Running Mkbootstrap for Repacker ()
> chmod 644 Repacker.bs
> rm -f /home/michael/OME/src/perl2/blib/arch/auto/Repacker/Repacker.so
> cc -shared -L/usr/local/lib Repacker.o -o
> /home/michael/OME/src/perl2/blib/arch/auto/Repacker/Repacker.so \
> \
>
> chmod 755 /home/michael/OME/src/perl2/blib/arch/auto/Repacker/Repacker.so
> cp Repacker.bs
> /home/michael/OME/src/perl2/blib/arch/auto/Repacker/Repacker.bs
> chmod 644 /home/michael/OME/src/perl2/blib/arch/auto/Repacker/Repacker.bs
> Manifying /home/michael/OME/src/perl2/blib/man3/Repacker.3pm
> make[1]: Leaving directory
> `/home/michael/OME/src/perl2/OME/ImportExport/Repacker'
> cp OME/Java/omejava /home/michael/OME/src/perl2/blib/script/omejava
> /usr/bin/perl "-MExtUtils::MY" -e "MY->fixin(shift)"
> /home/michael/OME/src/perl2/blib/script/omejava
> Manifying
> /home/michael/OME/src/perl2/blib/man3/OME::Remote::Apache::XMLRPC.3pm
> Manifying
> /home/michael/OME/src/perl2/blib/man3/OME::Web::DBObjRender::__OME_AnalysisChain_Link.3pm
> Manifying /home/michael/OME/src/perl2/blib/man3/OME::Task.3pm
> Manifying
> /home/michael/OME/src/perl2/blib/man3/OME::ImportEngine::STKreader.3pm
> Manifying
> /home/michael/OME/src/perl2/blib/man3/OME::Web::ImageDetailAnnotator.3pm
> Manifying
> /home/michael/OME/src/perl2/blib/man3/OME::AnalysisChainExecution::NodeExecution.3pm
> Manifying
> /home/michael/OME/src/perl2/blib/man3/OME::Web::DBObjDetail::__OME_Image.3pm
> Manifying /home/michael/OME/src/perl2/blib/man3/OME::LSID.3pm
> Manifying
> /home/michael/OME/src/perl2/blib/man3/OME::ImportEngine::BMPUtils.3pm
> Manifying
> /home/michael/OME/src/perl2/blib/man3/OME::ImportExport::ResolveFiles.3pm
> Manifying
> /home/michael/OME/src/perl2/blib/man3/OME::Image::LocalPixels.3pm
> Manifying
> /home/michael/OME/src/perl2/blib/man3/OME::Remote::Apache1_99.3pm
> Manifying /home/michael/OME/src/perl2/blib/man3/OME::Web::Search.3pm
> Manifying
> /home/michael/OME/src/perl2/blib/man3/OME::Analysis::Modules::Classification::WND_CHARM_Trainer.3pm
> Manifying
> /home/michael/OME/src/perl2/blib/man3/OME::SemanticType::Superclass.3pm
> Manifying /home/michael/OME/src/perl2/blib/man3/OME::Util::Import.3pm
> Manifying /home/michael/OME/src/perl2/blib/man3/OME::File.3pm
> Manifying
> /home/michael/OME/src/perl2/blib/man3/OME::Remote::Facades::AnnotationFacade.3pm
> Manifying
> /home/michael/OME/src/perl2/blib/man3/OME::ModuleExecution::ParentalOutput.3pm
> Manifying
> /home/michael/OME/src/perl2/blib/man3/OME::Web::DBObjRender::__OME_Image.3pm
> Manifying
> /home/michael/OME/src/perl2/blib/man3/OME::AnalysisChainExecution.3pm
> Manifying
> /home/michael/OME/src/perl2/blib/man3/OME::Tasks::ImportManager.3pm
> Manifying
> /home/michael/OME/src/perl2/blib/man3/OME::Web::DBObjRender::__SamplePreparation.3pm
> Manifying
> /home/michael/OME/src/perl2/blib/man3/OME::Analysis::Modules::Statistics::StackStatistics.3pm
> Manifying
> /home/michael/OME/src/perl2/blib/man3/OME::Analysis::Engine::Worker.3pm
> Manifying
> /home/michael/OME/src/perl2/blib/man3/OME::Web::DBObjDetail::__OME_Module.3pm
> Manifying
> /home/michael/OME/src/perl2/blib/man3/OME::Tasks::ProjectManager.3pm
> Manifying
> /home/michael/OME/src/perl2/blib/man3/OME::ImportEngine::BioradReader.3pm
> Manifying
> /home/michael/OME/src/perl2/blib/man3/OME::Remote::Facades::ConfigFacade.3pm
> Manifying
> /home/michael/OME/src/perl2/blib/man3/OME::Web::DBObjRender::__OriginalFile.3pm
> Manifying
> /home/michael/OME/src/perl2/blib/man3/OME::Remote::Facades::ProjectFacade.3pm
> Manifying
> /home/michael/OME/src/perl2/blib/man3/OME::ImportExport::SemanticTypeImport.3pm
> Manifying
> /home/michael/OME/src/perl2/blib/man3/OME::Web::TemplateManager.3pm
> Manifying
> /home/michael/OME/src/perl2/blib/man3/OME::Tasks::ImageManager.3pm
> Manifying
> /home/michael/OME/src/perl2/blib/man3/OME::Web::DBObjDetail::__CategoryGroup.3pm
> Manifying
> /home/michael/OME/src/perl2/blib/man3/OME::Analysis::Modules::ROI::ImageROI.3pm
> Manifying
> /home/michael/OME/src/perl2/blib/man3/OME::Tasks::MultipleSTAnnotationManager.3pm
> Manifying /home/michael/OME/src/perl2/blib/man3/OME::Dataset.3pm
> Manifying
> /home/michael/OME/src/perl2/blib/man3/OME::Web::Search::Experimenter.3pm
> Manifying /home/michael/OME/src/perl2/blib/man3/OME::Web::DBObjCreate.3pm
> Manifying
> /home/michael/OME/src/perl2/blib/man3/OME::Remote::SerializerXMLRPC.3pm
> Manifying
> /home/michael/OME/src/perl2/blib/man3/OME::ModuleExecution::SemanticTypeOutput.3pm
> Manifying
> /home/michael/OME/src/perl2/blib/man3/OME::Analysis::Engine::DistributedAnalysisEngineClient.3pm
> Manifying /home/michael/OME/src/perl2/blib/man3/OME::Image::Pixels.3pm
> Manifying
> /home/michael/OME/src/perl2/blib/man3/OME::Web::DBObjCreate::OME_Dataset.3pm
> Manifying /home/michael/OME/src/perl2/blib/man3/OME::Util::Annotate.3pm
> Manifying
> /home/michael/OME/src/perl2/blib/man3/OME::SemanticType::BootstrapGroup.3pm
> Manifying /home/michael/OME/src/perl2/blib/man3/OME::Configuration.3pm
> Manifying /home/michael/OME/src/perl2/blib/man3/OME::Tasks::ImageTasks.3pm
> Manifying
> /home/michael/OME/src/perl2/blib/man3/OME::Remote::Apache2::XMLRPC.3pm
> Manifying
> /home/michael/OME/src/perl2/blib/man3/OME::AnalysisChain::Link.3pm
> Manifying /home/michael/OME/src/perl2/blib/man3/OME::Factory.3pm
> Manifying
> /home/michael/OME/src/perl2/blib/man3/OME::Analysis::Modules::PPM::Gradient.3pm
> Manifying
> /home/michael/OME/src/perl2/blib/man3/OME::SemanticType::BootstrapExperimenterGroup.3pm
> Manifying
> /home/michael/OME/src/perl2/blib/man3/OME::ImportEngine::AbstractFormat.3pm
> Manifying
> /home/michael/OME/src/perl2/blib/man3/OME::AnalysisChain::Node.3pm
> Manifying
> /home/michael/OME/src/perl2/blib/man3/OME::Web::ImageAnnotationTable.3pm
> Manifying
> /home/michael/OME/src/perl2/blib/man3/OME::Web::DBObjRender::__ExternalLink.3pm
> Manifying
> /home/michael/OME/src/perl2/blib/man3/OME::Analysis::Handlers::MatlabHandler.3pm
> Manifying
> /home/michael/OME/src/perl2/blib/man3/OME::Web::DBObjRender::__Instrument.3pm
> Manifying
> /home/michael/OME/src/perl2/blib/man3/OME::SemanticType::Element.3pm
> Manifying
> /home/michael/OME/src/perl2/blib/man3/OME::Web::Util::Category.3pm
> Manifying /home/michael/OME/src/perl2/blib/man3/OME::SemanticType.3pm
> Manifying
> /home/michael/OME/src/perl2/blib/man3/OME::Analysis::Modules::ROI::Image2DTiledROIs.3pm
> Manifying
> /home/michael/OME/src/perl2/blib/man3/OME::Remote::DTO::GenericAssembler.3pm
> Manifying
> /home/michael/OME/src/perl2/blib/man3/OME::ImportEngine::Params.3pm
> Manifying
> /home/michael/OME/src/perl2/blib/man3/OME::Web::DBObjRender::__OME_Task.3pm
> Manifying /home/michael/OME/src/perl2/blib/man3/OME::Util::Dev.3pm
> Manifying /home/michael/OME/src/perl2/blib/man3/OME::Remote.3pm
> Manifying
> /home/michael/OME/src/perl2/blib/man3/OME::Tasks::NotificationManager.3pm
> Manifying /home/michael/OME/src/perl2/blib/man3/OME::Tasks::AEFacade.3pm
> Manifying
> /home/michael/OME/src/perl2/blib/man3/OME::Remote::Facades::DatasetFacade.3pm
> Manifying
> /home/michael/OME/src/perl2/blib/man3/OME::Java::SemanticTypeInterface.3pm
> Manifying
> /home/michael/OME/src/perl2/blib/man3/OME::Web::DBObjRender::__OME_ModuleExecution.3pm
> Manifying
> /home/michael/OME/src/perl2/blib/man3/OME::Web::DBObjRender::__BayesNetClassifier.3pm
> Manifying
> /home/michael/OME/src/perl2/blib/man3/OME::Web::DBObjRender::__OME_DataTable_Column.3pm
> Manifying
> /home/michael/OME/src/perl2/blib/man3/OME::Tasks::DatasetManager.3pm
> Manifying
> /home/michael/OME/src/perl2/blib/man3/OME::Web::DBObjRender::__Probe.3pm
> Manifying /home/michael/OME/src/perl2/blib/man3/OME::Web::Home.3pm
> Manifying
> /home/michael/OME/src/perl2/blib/man3/OME::Util::Data::dbAdmin.3pm
> Manifying
> /home/michael/OME/src/perl2/blib/man3/OME::ImportEngine::LSMreader.3pm
> Manifying
> /home/michael/OME/src/perl2/blib/man3/OME::Web::Authenticated.3pm
> Manifying
> /home/michael/OME/src/perl2/blib/man3/OME::Database::Delegate.3pm
> Manifying
> /home/michael/OME/src/perl2/blib/man3/OME::Web::Search::OME_ModuleExecution.3pm
> Manifying /home/michael/OME/src/perl2/blib/man3/OME::DataTable::Column.3pm
> Manifying
> /home/michael/OME/src/perl2/blib/man3/OME::ImportExport::Repacker::Repacker.3pm
> Manifying
> /home/michael/OME/src/perl2/blib/man3/OME::Web::DBObjRender::__OME_SemanticType_Element.3pm
> Manifying
> /home/michael/OME/src/perl2/blib/man3/OME::Java::DTOInterface.3pm
> Manifying
> /home/michael/OME/src/perl2/blib/man3/OME::ModuleExecution::VirtualMEXMap.3pm
> Manifying
> /home/michael/OME/src/perl2/blib/man3/OME::Util::Admin::Uninstall.3pm
> Manifying
> /home/michael/OME/src/perl2/blib/man3/OME::Analysis::Modules::Statistics::PlaneStatistics.3pm
> Manifying /home/michael/OME/src/perl2/blib/man3/OME::Util::cURL.3pm
> Manifying
> /home/michael/OME/src/perl2/blib/man3/OME::Remote::Facades::ChainRetrievalFacade.3pm
> Manifying
> /home/michael/OME/src/perl2/blib/man3/OME::Web::MultiObjCreate.3pm
> Manifying /home/michael/OME/src/perl2/blib/man3/OME::Image.3pm
> Manifying
> /home/michael/OME/src/perl2/blib/man3/OME::Web::GeneStageAnnotator.3pm
> Manifying /home/michael/OME/src/perl2/blib/man3/OME::Tasks::OMEExport.3pm
> Manifying
> /home/michael/OME/src/perl2/blib/man3/OME::Remote::Facades::ImportFacade.3pm
> Manifying
> /home/michael/OME/src/perl2/blib/man3/OME::ImportEngine::ImportEngine.3pm
> MOME/ImportExport/HierarchyExport.pm:139: Unknown escape E<not>
> OME/Web/ImageAnnotationBrowser.pm:387: Unknown command paragraph "=head
> getDimLayoutCode"
> OME/Web/ImageAnnotationBrowser.pm:704: Unknown command paragraph "=head
> copyArray
> generate a copy of a 1-d array
> =cut"
> OME/SessionManager.pm:244: Unknown command paragraph "=sub promptAndLogin"
> anifying
> /home/michael/OME/src/perl2/blib/man3/OME::Remote::Facades::SessionFacade.3pm
> Manifying
> /home/michael/OME/src/perl2/blib/man3/OME::Analysis::Handlers::DefaultLoopHandler.3pm
> Manifying /home/michael/OME/src/perl2/blib/man3/OME::Module.3pm
> Manifying /home/michael/OME/src/perl2/blib/man3/OME::AnalysisChain.3pm
> Manifying /home/michael/OME/src/perl2/blib/man3/OME::Remote::DTO.3pm
> Manifying
> /home/michael/OME/src/perl2/blib/man3/OME::Web::ImageAnnotationDetail.3pm
> Manifying
> /home/michael/OME/src/perl2/blib/man3/OME::Web::DBObjRender::__Fluorofor.3pm
> Manifying /home/michael/OME/src/perl2/blib/man3/OME::UserState.3pm
> Manifying
> /home/michael/OME/src/perl2/blib/man3/OME::ImportExport::HierarchyExport.3pm
> Manifying
> /home/michael/OME/src/perl2/blib/man3/OME::Web::Search::OME_Project.3pm
> Manifying
> /home/michael/OME/src/perl2/blib/man3/OME::ImportExport::HierarchyImport.3pm
> Manifying
> /home/michael/OME/src/perl2/blib/man3/OME::Tasks::ClassifierTasks.3pm
> Manifying
> /home/michael/OME/src/perl2/blib/man3/OME::Util::Admin::Configure.3pm
> Manifying /home/michael/OME/src/perl2/blib/man3/OME::Project.3pm
> Manifying
> /home/michael/OME/src/perl2/blib/man3/OME::Util::Annotate::SpreadsheetReader.3pm
> Manifying
> /home/michael/OME/src/perl2/blib/man3/OME::Web::DBObjDetail::__OME_Dataset.3pm
> Manifying
> /home/michael/OME/src/perl2/blib/man3/OME::Analysis::Modules::Classification::SignatureStitcher.3pm
> Manifying
> /home/michael/OME/src/perl2/blib/man3/OME::Web::ImageAnnotationBrowser.3pm
> Manifying
> /home/michael/OME/src/perl2/blib/man3/OME::ImportEngine::BMPreader.3pm
> Manifying
> /home/michael/OME/src/perl2/blib/man3/OME::ImportEngine::TIFFreader.3pm
> Manifying
> /home/michael/OME/src/perl2/blib/man3/OME::SemanticType::Label.3pm
> Manifying
> /home/michael/OME/src/perl2/blib/man3/OME::Web::DBObjRender::__Objective.3pm
> Manifying
> /home/michael/OME/src/perl2/blib/man3/OME::ImportExport::ModuleImport.3pm
> Manifying
> /home/michael/OME/src/perl2/blib/man3/OME::Web::DBObjRender::__DevelopmentalStage.3pm
> Manifying
> /home/michael/OME/src/perl2/blib/man3/OME::Web::DBObjCreate::Category.3pm
> Manifying
> /home/michael/OME/src/perl2/blib/man3/OME::Analysis::Engine::Job.3pm
> Manifying
> /home/michael/OME/src/perl2/blib/man3/OME::Analysis::Engine::DistributedAnalysisEngineCGI.3pm
> Manifying /home/michael/OME/src/perl2/blib/man3/OME::Util::Commands.3pm
> Manifying
> /home/michael/OME/src/perl2/blib/man3/OME::Analysis::Modules::Classification::ML_BayesNet_Trainer.3pm
> Manifying
> /home/michael/OME/src/perl2/blib/man3/OME::Tasks::SemanticTypeManager.3pm
> Manifying /home/michael/OME/src/perl2/blib/man3/OME::Analysis::Engine.3pm
> Manifying
> /home/michael/OME/src/perl2/blib/man3/OME::Remote::Facades::AnalysisFacade.3pm
> Manifying
> /home/michael/OME/src/perl2/blib/man3/OME::Web::DBObjRender::__OME_AnalysisChainExecution_NodeExecution.3pm
> Manifying /home/michael/OME/src/perl2/blib/man3/OME::Feature.3pm
> Manifying /home/michael/OME/src/perl2/blib/man3/OME::Web::GetGraphics.3pm
> Manifying
> /home/michael/OME/src/perl2/blib/man3/OME::Analysis::Modules::PPM::Typecast.3pm
> Manifying /home/michael/OME/src/perl2/blib/man3/OME::DataTable.3pm
> Manifying
> /home/michael/OME/src/perl2/blib/man3/OME::Util::Annotate::AnnotationWizards.3pm
> Manifying
> /home/michael/OME/src/perl2/blib/man3/OME::Web::DBObjRender::__Experimenter.3pm
> Manifying
> /home/michael/OME/src/perl2/blib/man3/OME::Web::DatasetOnGoogleMaps.3pm
> Manifying
> /home/michael/OME/src/perl2/blib/man3/OME::Web::AccessManager.3pm
> Manifying
> /home/michael/OME/src/perl2/blib/man3/OME::Analysis::Modules::Classification::WND_CHARM_Prediction.3pm
> Manifying
> /home/michael/OME/src/perl2/blib/man3/OME::Analysis::Modules::ROI::Image2DROIs.3pm
> Manifying /home/michael/OME/src/perl2/blib/man3/OME::SessionManager.3pm
> Manifying /home/michael/OME/src/perl2/blib/man3/OME::Tasks::OMEImport.3pm
> Manifying /home/michael/OME/src/perl2/blib/man3/OME::Remote::Apache2.3pm
> Manifying
> /home/michael/OME/src/perl2/blib/man3/OME::Util::OMECommander.3pm
> Manifying
> /home/michael/OME/src/perl2/blib/man3/OME::ImportEngine::DICOMreader.3pm
> Manifying
> /home/michael/OME/src/perl2/blib/man3/OME::Remote::Facades::HisOME/Web/DBObjRender.pm:615:
> Unknown command paragraph "=Head2 renderData"
> OME/Web/DBObjRender.pm:1130: Unknown command paragraph "=Head2
> _getLSIDmanager"
> toryFacade.3pm
> Manifying
> /home/michael/OME/src/perl2/blib/man3/OME::Web::DBObjDetail::__OME_ModuleExecution.3pm
> Manifying
> /home/michael/OME/src/perl2/blib/man3/OME::Analysis::Modules::Histogram::PlaneHistogram.3pm
> Manifying
> /home/michael/OME/src/perl2/blib/man3/OME::Analysis::Engine::NonblockingSlaveWorkerCGI.3pm
> Manifying /home/michael/OME/src/perl2/blib/man3/OME::Web::DBObjDetail.3pm
> Manifying
> /home/michael/OME/src/perl2/blib/man3/OME::Tasks::ChainManager.3pm
> Manifying
> /home/michael/OME/src/perl2/blib/man3/OME::Web::DBObjRender::__OME_DataTable.3pm
> Manifying
> /home/michael/OME/src/perl2/blib/man3/OME::Tasks::AnnotationManager.3pm
> Manifying
> /home/michael/OME/src/perl2/blib/man3/OME::Analysis::Modules::PPM::FourierTransform.3pm
> Manifying /home/michael/OME/src/perl2/blib/man3/OME::Image::Server.3pm
> Manifying /home/michael/OME/src/perl2/blib/man3/OME::Remote::Apache.3pm
> Manifying
> /home/michael/OME/src/perl2/blib/man3/OME::Web::DBObjRender::__OME_SemanticType.3pm
> Manifying
> /home/michael/OME/src/perl2/blib/man3/OME::Analysis::Handlers::NoopHandler.3pm
> Manifying /home/michael/OME/src/perl2/blib/man3/OME::Fork.3pm
> Manifying /home/michael/OME/src/perl2/blib/man3/OME::Web::DBObjTable.3pm
> Manifying
> /home/michael/OME/src/perl2/blib/man3/OME::ImportExport::DataHistoryExport.3pm
> Manifying
> /home/michael/OME/src/perl2/blib/man3/OME::Tasks::PixelsManager.3pm
> Manifying
> /home/michael/OME/src/perl2/blib/man3/OME::Tasks::CategoryManager.3pm
> Manifying
> /home/michael/OME/src/perl2/blib/man3/OME::Analysis::Modules::PPM::Typecast2DerivedPixels.3pm
> Manifying
> /home/michael/OME/src/perl2/blib/man3/OME::Analysis::Modules::Classification::ML_BayesNet_Classifier.3pm
> Manifying
> /home/michael/OME/src/perl2/blib/man3/OME::Web::MultiObjCreate::ExperimentProtocol.3pm
> Manifying
> /home/michael/OME/src/perl2/blib/man3/OME::ImportEngine::GELreader.3pm
> Manifying /home/michael/OME/src/perl2/blib/man3/OME::Web.3pm
> Manifying
> /home/michael/OME/src/perl2/blib/man3/OME::Util::Admin::UserAdmin.3pm
> Manifying
> /home/michael/OME/src/perl2/blib/man3/OME::Image::Server::Pixels.3pm
> Manifying
> /home/michael/OME/src/perl2/blib/man3/OME::Web::DBObjRender::__Husbandry.3pm
> Manifying
> /home/michael/OME/src/perl2/blib/man3/OME::Web::DBObjRender::__OME_AnalysisChainExecution.3pm
> Manifying
> /home/michael/OME/src/perl2/blib/man3/OME::Analysis::Engine::FeatureHierarchy.3pm
> Manifying
> /home/michael/OME/src/perl2/blib/man3/OME::ModuleExecution::ActualInput.3pm
> Manifying /home/michael/OME/src/perl2/blib/man3/OME::Web::DBObjRender.3pm
> Manifying
> /home/michael/OME/src/perl2/blib/man3/OME::Web::DBObjRender::__Category.3pm
> Manifying /home/michael/OME/src/perl2/blib/man3/OME::LocalFile.3pm
> Manifying
> /home/michael/OME/src/perl2/blib/man3/OME::Tasks::ModuleExecutionManager.3pm
> Manifying /home/michael/OME/src/perl2/blib/man3/OME::Remote::RPC2.3pm
> Manifying
> /home/michael/OME/src/perl2/blib/man3/OME::Configuration::Variable.3pm
> Manifying
> /home/michael/OME/src/perl2/blib/man3/OME::SemanticType::BootstrapExperimenter.3pm
> Manifying /home/michael/OME/src/perl2/blib/man3/omeapi.3pm
> Manifying
> /home/michael/OME/src/perl2/blib/man3/OME::Web::DBObjRender::__OME_Dataset.3pm
> Manifying
> /home/michael/OME/src/perl2/blib/man3/OME::ImportEngine::TIFFUtils.3pm
> Manifying
> /home/michael/OME/src/perl2/blib/man3/OME::Tasks::HistoryManager.3pm
> Manifying
> /home/michael/OME/src/perl2/blib/man3/OME::Util::Admin::GroupAdmin.3pm
> Manifying
> /home/michael/OME/src/perl2/blib/man3/OME::Remote::DTO::ProjectAssembler.3pm
> Manifying
> /home/michael/OME/src/perl2/blib/man3/OME::Util::Admin::OMEAdmin.3pm
> Manifying
> /home/michael/OME/src/perl2/blib/man3/OME::AnalysisChainExecutionUserInputs.3pm
> Manifying
> /home/michael/OME/src/perl2/blib/man3/OME::Tasks::LSIDManager.3pm
> Manifying
> /home/michael/OME/src/perl2/blib/man3/OME::Tasks::AttributeManager.3pm
> Manifying
> /home/michael/OME/src/perl2/blib/man3/OME::Web::DBObjRender::__OME_AnalysisChain_Node.3pm
> Manifying
> /home/michael/OME/src/perl2/blib/man3/OME::Remote::Facades::GenericFacade.3pm
> Manifying /home/michael/OME/src/perl2/blib/man3/OME.3pm
> Manifying
> /home/michael/OME/src/perl2/blib/man3/OME::SemanticType::BootstrapRepository.3pm
> Manifying
> /home/michael/OME/src/perl2/blib/man3/OME::Web::DBObjRender::__Pixels.3pm
> Manifying /home/michael/OME/src/perl2/blib/man3/OME::Analysis::Handler.3pm
> Manifying
> /home/michael/OME/src/perl2/blib/man3/OME::Web::Util::Dataset.3pm
> Manifying /home/michael/OME/src/perl2/blib/man3/OME::ModuleExecution.3pm
> Manifying
> /home/michael/OME/src/perl2/blib/man3/OME::Remote::Facades::ModuleExecutionFacade.3pm
> Manifying
> /home/michael/OME/src/perl2/blib/man3/OME::Analysis::Modules::Histogram::StackHistogram.3pm
> Manifying /home/michael/OME/src/perl2/blib/man3/omemodules.3pm
> Manifying
> /home/michael/OME/src/perl2/blib/man3/OME::Web::DBObjDetail::__OME_Project.3pm
> Manifying
> /home/michael/OME/src/perl2/blib/man3/OME::SemanticType::Element::Label.3pm
> Manifying /home/michael/OME/src/perl2/blib/man3/OME::Remote::Facade.3pm
> Manifying /home/michael/OME/src/perl2/blib/man3/OME::Matlab::Matlab.3pm
> Manifying /home/michael/OME/src/perl2/blib/man3/OME::Session.3pm
> Manifying
> /home/michael/OME/src/perl2/blib/man3/OME::Database::PostgresDelegate.3pm
> Manifying
> /home/michael/OME/src/perl2/blib/man3/OME::Remote::DeserializerXMLRPC.3pm
> Manifying
> /home/michael/OME/src/perl2/blib/man3/OME::Remote::Prototypes.3pm
> Manifying /home/michael/OME/src/perl2/blib/man3/OME::Image::Pix::Pix.3pm
> Manifying
> /home/michael/OME/src/perl2/blib/man3/OME::Tasks::ModuleTasks.3pm
> Manifying /home/michael/OME/src/perl2/blib/man3/newdevelopers.3pm
> Manifying
> /home/michael/OME/src/perl2/blib/man3/OME::Remote::Facades::ModuleRetrievalFacade.3pm
> Manifying /home/michael/OME/src/perl2/blib/man3/OME::DBObject.3pm
> Manifying
> /home/michael/OME/src/perl2/blib/man3/OME::Web::DBObjCreate::OME_Project.3pm
> Manifying
> /home/michael/OME/src/perl2/blib/man3/OME::ImportEngine::DVreader.3pm
> Manifying
> /home/michael/OME/src/perl2/blib/man3/OME::Image::Server::File.3pm
> Manifying
> /home/michael/OME/src/perl2/blib/man3/OME::Tasks::OMEXMLImportExport.3pm
> Manifying
> /home/michael/OME/src/perl2/blib/man3/OME::Remote::Facades::XMLUtils.3pm
> Manifying
> /home/michael/OME/src/perl2/blib/man3/OME::Util::Annotate::SpreadsheetWriter.3pm
> Manifying
> /home/michael/OME/src/perl2/blib/man3/OME::Web::DBObjDetail::__Category.3pm
> "
>
> INSTALLING MODULE -- 'make install'
> SUCCESS -- OUTPUT: "make[1]: Entering directory
> `/home/michael/OME/src/perl2/OME/Image/Pix'
> make[1]: Leaving directory `/home/michael/OME/src/perl2/OME/Image/Pix'
> make[1]: Entering directory
> `/home/michael/OME/src/perl2/OME/ImportExport/Repacker'
> make[1]: Leaving directory
> `/home/michael/OME/src/perl2/OME/ImportExport/Repacker'
> Writing /usr/local/lib/perl/5.8.8/auto/OME/.packlist
> Appending installation info to /usr/local/lib/perl/5.8.8/perllocal.pod
> "
>
>
> _______________________________________________
> ome-devel mailing list
> ome-devel at lists.openmicroscopy.org.uk
> http://lists.openmicroscopy.org.uk/mailman/listinfo/ome-devel
>
>
-------------- next part --------------
An HTML attachment was scrubbed...
URL: http://lists.openmicroscopy.org.uk/pipermail/ome-devel/attachments/20080528/9513fa45/attachment-0001.htm
More information about the ome-devel
mailing list