[ome-devel] import analysis chain

kris kris at cs.ucsb.edu
Mon Mar 20 21:40:52 GMT 2006


In order to change the variable, I edited the database directly
setting the analysis chain ID to the one I had defined.

Is there a way to change it within OME? Command line?
We've basically opted for a minimalistic import analysis chain.

Anyway, the problem has gone away for the time being.



On Mon, 2006-03-20 at 15:53 -0500, Ilya Goldberg wrote:
> The import chain configuration variable isn't really meant to be read- 
> only.  Maybe "write rarely"?  If your installation consistently needs  
> a different import chain, this is what the set up is supposed to take  
> care of by changing the import chain setting in the configuration.   
> If you want different import chains depending on image type, or user,  
> or other state in the system, then its probably not the right  
> mechanism because it affects the system globally.  We don't have a  
> mechanism to change import chains based on system state, but that  
> would not be so hard to arrange.
> 
> -Ilya
> 
> On Mar 17, 2006, at 8:24 PM, kris wrote:
> 
> > Hello,
> >
> > What's the expected way to change the Import analysis chain?
> >
> > We would like to turn off the standard import analysis chain
> > and run specialized ones from our image importers/annotators.
> >
> > However, Configuration variable   import_chain_id points to import
> > chain installed at OME installation.  The documentation implies
> > the configuration variable is somewhat read-only.  We would
> > like to point the import_chain_id at a very simple module and
> > then run specialized ones elsewhere.
> >
> >
> > -- 
> > Kristian Kvilekval
> > kris at cs.ucsb.edu  http://www.cs.ucsb.edu/~kris w:805-893-2526 h: 
> > 504-9756
> >
> > _______________________________________________
> > ome-devel mailing list
> > ome-devel at lists.openmicroscopy.org.uk
> > http://lists.openmicroscopy.org.uk/mailman/listinfo/ome-devel
> >
-- 
Kristian Kvilekval
kris at cs.ucsb.edu  http://www.cs.ucsb.edu/~kris w:805-893-2526 h:504-9756



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