[ome-users] Camera Position in DV Files

Alexander Al Saroori saroori.alexander at googlemail.com
Mon Jun 20 19:33:24 BST 2016


Hi together,

I have some problems to get the camera position stored in the metadata 
of my deltavision (DV) files, using Bio-Formats in Matlab. It works very 
good for single image stacks (with several z-slices) but not for data 
stacks with several timepoints and just one z-position. (experimental 
setup: 5000 images (every 10ms one image)). I know that the information 
of the camera position is stored in the time series since I can get the 
information using Softworx (provided Deltavision software).

Working minimal code for 3D-Stack (several z-slices)

r= bfGetReader(fpath);
m = r.getMetadataStore();
m.getPlanePositionZ(0, 0)

ans = ome.units.quantity.Length: value[3612.2], unit[reference frame] 
stored as java.lang.Float


For the data stack with several timepoints, I just got

ans = []

Do I miss something, or is there any other commando I could use to get 
this information from my data stack?

Thank you very much!

Cheers,

Alex


-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://lists.openmicroscopy.org.uk/pipermail/ome-users/attachments/20160620/2e444276/attachment.html>


More information about the ome-users mailing list