[ome-users] Help

[David Gault (Staff)]

Hi,

The error is because Bio-Formats has been unable to locate any associated pixels file. It expects a folder Data with atsf, aiix and aisf files inside.
Do you have this folder of files with the mvd2 file?

With Thanks,
David Gault

> On 6 May 2019, at 20:39, Chaouni, Rita <rita.chaouni at kcl.ac.uk> wrote:
>
> Hello,
>
> I am experiencing issues opening up an .mvd2 file from velocity on Fiji, which has the updated bio-formats plugin. The error message I am getting is pasted below. Any help is greatly appreciated!
> I have a attached an example of the file I am trying to open.
>
>
> (Fiji Is Just) ImageJ 2.0.0-rc-69/1.52n; Java 1.8.0_66 [64-bit]; Mac OS X 10.12.6; 946MB of 7836MB (12%)
>
> java.lang.IllegalArgumentException: Invalid series: 0
> at loci.formats.FormatReader.seriesToCoreIndex(FormatReader.java:1253)
> at loci.formats.FormatReader.setSeries(FormatReader.java:934)
> at loci.formats.in.VolocityReader.initFile(VolocityReader.java:691)
> at loci.formats.FormatReader.setId(FormatReader.java:1395)
> at loci.plugins.in.ImportProcess.initializeFile(ImportProcess.java:499)
> at loci.plugins.in.ImportProcess.execute(ImportProcess.java:142)
> at loci.plugins.in.Importer.showDialogs(Importer.java:140)
> at loci.plugins.in.Importer.run(Importer.java:76)
> at loci.plugins.LociImporter.run(LociImporter.java:78)
> at ij.IJ.runUserPlugIn(IJ.java:229)
> at ij.IJ.runPlugIn(IJ.java:193)
> at ij.IJ.runPlugIn(IJ.java:182)
>
> <grhTrans L2.mvd2>_______________________________________________
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