[ome-users] Opening DM4 Gatan

David Gault (Staff) d.gault at dundee.ac.uk
Fri May 11 16:55:01 BST 2018


Hi Eric,

What version of Bio-Formats is FIJI currently reporting (can be found under Help -> About Plugins -> Bio-Formats Plugins)?
Do you happen to know what version you had previously installed?

If your current version is showing as 5.8.2 then can you please upload a sample file to https://www.openmicroscopy.org/qa2/qa/upload/ for testing.

With Thanks,
David GGault

On 11 May 2018, at 15:30, Young, Eric Jeffrey <younge16 at msu.edu<mailto:younge16 at msu.edu>> wrote:

Hello,

I currently unable to open my DM4 files with Bioformats in Fiji (ImageJ). This occurred after I used the updater. I have tried uninstalling the Bioformats package and the re-installing from here.(https://www.openmicroscopy.org/bio-formats/)
Bio-Formats | Open Microscopy Environment (OME)<https://www.openmicroscopy.org/bio-formats/>
www.openmicroscopy.org<http://www.openmicroscopy.org/>
Bio-Formats is a software tool for reading and writing image data using standardized, open formats. Bio-Formats is a community driven project with a standardized application interface that supports open source analysis programs like ImageJ, CellProfiler and Icy, informatics solutions like OMERO and the JCB DataViewer, and commercial programs ...



Attached are two images of the errors which occur. I receive the second, longer error when I try to open the files from the Bioformat Importer from the plugin drop down.

Any help on this would be really appreciated. I can't access any of my data now. I just want to say for the record, I had no difficulty before.

EY


**********************************************
Eric Young
PhD Candidate
Department of Biochemistry & Molecular Biology
DOE-Plant Research Lab
Michigan State University
612 Wilson Road, Room 206<https://maps.google.com/?q=612+Wilson+Road,+Room+206+East+Lansing,+MI+48824&entry=gmail&source=g>
East Lansing, MI 48824<https://maps.google.com/?q=612+Wilson+Road,+Room+206+East+Lansing,+MI+48824&entry=gmail&source=g>
**********************************************
<Screen Shot 2018-05-11 at 10.25.34 AM.png><Screen Shot 2018-05-11 at 10.25.52 AM.png>_______________________________________________
ome-users mailing list
ome-users at lists.openmicroscopy.org.uk<mailto:ome-users at lists.openmicroscopy.org.uk>
http://lists.openmicroscopy.org.uk/mailman/listinfo/ome-users


The University of Dundee is a registered Scottish Charity, No: SC015096
-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://lists.openmicroscopy.org.uk/pipermail/ome-users/attachments/20180511/3aac602e/attachment.html>


More information about the ome-users mailing list