[ome-users] Problem to open .lif files

[David Gault (Staff)]

Hi Alejandro,

Thank you submitting this bug report and providing the error report and sample file.
I have been able to test the file provided and reproduced the issue exactly as you described. I have begun carrying out some initial debugging into the root cause of the problem and have opened a Trello card on the Bio-Formats inbox to track the issue:
https://trello.com/c/mQRzQcUV/274-lif-illegalargumentexception

With Thanks,
David Gault

On 21 Aug 2018, at 07:27, Alejandro Molina Morais <amolina at cbm.csic.es<mailto:amolina at cbm.csic.es>> wrote:


Hello,

I have a problem with the bioformats plugin, when I try to open a lif file, the software shows me this error (attached file "bug error").

My release of BioFormat is 5.9.1 (attached file "BioFormats release"). My operating system is Windows 7 Professional and my version of Java is 8.0.1810.13 (64-bits).


The problem image is a hyperstack with three channels (Ch0, Ch1, Ch2) and 225 tiles (15x15, 647 MB).

The lif files is not damaged because Metamorph and LAS AF can open it. I've never had a problem with lif files in Bioformats, it is the first time.

I've upload an example file to the "QA system".


Kind regards.

Alejandro.




<bug error.txt><BioFormats release.PNG>_______________________________________________
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