[ome-users] Recurrent FIJI updater error

[Balaji Ramalingam (Staff)]

Hi Vincent,

Thank you for sharing your screenshots.
This does not look like a core bio-formats issue. Could you please get in touch with the ImageJ forum, and check if they could suggest a work-around?

Best,
Balaji


From: Vincent GIGOT <Vincent.Gigot at u-bourgogne.fr>
Date: Monday, 18 September 2017 at 13:39
To: "Balaji Ramalingam (Staff)" <b.ramalingam at dundee.ac.uk>
Subject: Re: [ome-users] Recurrent FIJI updater error

Thanks for your answer.
You can see following, the screenshot when update crashes :

[cid:image001.png at 01D3321C.995628B0]

I am using the latest version of FIJI v1.51p.

Best.
Vince.

Le 08/09/2017 à 15:41, Balaji Ramalingam (Staff) a écrit :
Hi,

Thank you for sharing your issue.

Could you please send us a screenshot of your managed update sites list?
Please follow the following link to access the same in your Fiji updater,
http://imagej.net/List_of_update_sites

It would also help if you could share the version of Fiji that you are currently working with.
This would help us troubleshoot your issue in better details.

Best,
Balaji

From: ome-users <ome-users-bounces at lists.openmicroscopy.org.uk><mailto:ome-users-bounces at lists.openmicroscopy.org.uk> on behalf of Vincent GIGOT <Vincent.Gigot at u-bourgogne.fr><mailto:Vincent.Gigot at u-bourgogne.fr>
Reply-To: OME User Support List <ome-users at lists.openmicroscopy.org.uk><mailto:ome-users at lists.openmicroscopy.org.uk>
Date: Wednesday, 6 September 2017 at 10:14
To: "ome-users at lists.openmicroscopy.org.uk"<mailto:ome-users at lists.openmicroscopy.org.uk> <ome-users at lists.openmicroscopy.org.uk><mailto:ome-users at lists.openmicroscopy.org.uk>
Subject: Re: [ome-users] Recurrent FIJI updater error

I can add this error message :

java.lang.RuntimeException: Incorrect file size for F:\VGigot\TRAVAUX\TRAITE~1\Fiji.app\update\jars\bio-formats\turbojpeg-5.7.0.jar: 5543 (expected 1295971)

I don't understand how to deal with a problem of "file size" during installation or updating !

VG.


Le 06/09/2017 à 11:10, Vincent GIGOT a écrit :
Hello
I always get this first error message when the updater is running. It never ends the updating and stops everytime before applying all changes, and finally sends the second message :

[ERROR] Problem digesting F:\VGigot\TRAVAUX\TRAITE~1\Fiji.app\jars\bio-formats\turbojpeg-5.5.3.jar

Notice:
There are files which need to be updated/installed since other files depend on them:
jars/bio-formats/turbojpeg-5.7.0.jar, plugins/bio-formats_plugins-5.7.0.jar, plugins/Sholl_Analysis-3.7.0.jar

Even if i uninstall FIJI and reinstall it, the same problem occurs.

Any idea and advice to resolve that ?

Best regards.
Vincent Gigot.





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