[ome-users] problem opening CZI files in FIJI

Mark Carroll m.t.b.carroll at dundee.ac.uk
Tue Jan 10 14:12:56 GMT 2017


Dear Andreas,

 > When I open through the bioformats importer, I get the following
error message:
...
 > java.lang.IndexOutOfBoundsException: Index: 0, Size: 0
 >                 at java.util.ArrayList.rangeCheck(ArrayList.java:653)
 >                 at java.util.ArrayList.get(ArrayList.java:429)
 >                 at
 > loci.formats.in.ZeissCZIReader.initFile(ZeissCZIReader.java:633)
...
 > I am able to load them in Zen,
 > please tell me where I can upload the offending file (120 MB).

It was good to meet you last week at the facility managers meeting.
Thank you very much for testing with the latest Bio-Formats and for
providing the stack trace. Please go ahead and upload the file to
http://qa.openmicroscopy.org.uk/qa/upload/ and we'll take a look.

Cheers,

Mark

The University of Dundee is a registered Scottish Charity, No: SC015096


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