[ome-users] Viewer shows Zeiss SEM Auriga data as blank [5.2.4]

Kunis, Susanne Susanne.Kunis at Biologie.Uni-Osnabrueck.DE
Tue Sep 13 10:53:55 BST 2016


Hello Mark,

i think, the size shouldn't be the problem. I've uploaded the file now.

Cheers,

Susanne

-----Ursprüngliche Nachricht-----
Von: ome-users [mailto:ome-users-bounces at lists.openmicroscopy.org.uk] Im Auftrag von Mark Carroll
Gesendet: Dienstag, 13. September 2016 11:02
An: ome-users at lists.openmicroscopy.org.uk
Betreff: Re: [ome-users] Viewer shows Zeiss SEM Auriga data as blank [5.2.4]

On 09/12/2016 12:28 PM, Kunis, Susanne wrote:

> i have imported a Zeiss SEM Auriga image into OMERO 5.2.4. The import 
> log shows no errors and the image was successfully copy to the server, 
> but the thumbnail and the viewer show it as blank. Do you have any idee why?

I wonder if the problem could be
https://www.openmicroscopy.org/site/support/omero5.2/sysadmins/limitations.html#large-images-with-floating-point-pixel-data
-- that this is a large image with floating-point pixel intensities, which our clients do not yet render? When you click on the blank thumbnail in Insight then in the General tab in the right-hand metadata pane what does it say for Dimensions and Pixel Type?

If it's not a large floating-point image then please do feel free to upload it at http://qa.openmicroscopy.org.uk/qa/upload/ and we'll be happy to take a look.

Cheers,

Mark

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