[ome-users] FW: OMERO.qa - new feedback for QA Bug

Curtis Rueden ctrueden at wisc.edu
Wed Oct 12 16:36:21 BST 2016


Hi James,

Did you open the file using File > Import > Bio-Formats? If you used File >
Open, and you don't have the SCIFIO option enabled (in Edit > Options >
ImageJ2), then Bio-Formats will not be used, and the fact that the file is
an OME-TIFF will not be detected.

Regards,
Curtis

--
Curtis Rueden
LOCI software architect - http://loci.wisc.edu/software
ImageJ2 lead, Fiji maintainer - http://imagej.net/User:Rueden
Did you know ImageJ has a forum? http://forum.imagej.net/


On Wed, Oct 12, 2016 at 5:21 AM, WAINWRIGHT James <J.Wainwright at andor.com>
wrote:

> Hi there!
>
>
>
> I seem to have problems opening OME TIFF with Bio-Formats, but I can’t
> tell if it’s the file or Bio-Formats at fault.
>
>
>
> I’ve uploaded an example dataset as per the below. It has 4 Z and 3 time,
> but appears in FIJI as 12 time points.
>
>
>
> Let me know if I can provide any more information.
>
>
>
> Thanks!
>
>
>
> James
>
>
>
> *James Wainwright*
>
> Global Applications Specialist - Microscopy Systems
>
> *Tel:        *+44 (0) 2890 237 126 ext. 2130
>
> *Skype:  *andor.j.wainwright
>
> *Mob:     *+44 (0) 7834 710 834
> *Web:*     https://www.andor.com/microscopy-systems
>
>
> [image: logo]
>
>
>
> *From:* qa at openmicroscopy.org.uk [mailto:qa at openmicroscopy.org.uk]
> *Sent:* 12 October 2016 11:09
> *To:* WAINWRIGHT James <J.Wainwright at andor.com>
> *Subject:* OMERO.qa - new feedback for QA Bug
>
>
>
> *EXTERNAL EMAIL*
>
> *ATTACHMENT ADVISORY*
>
> Hi OMERO user!
>
> Thank you for your feedback. Please follow the status of the feedback on:
> https://www.openmicroscopy.org/qa2/qa/feedback/17373/?token=
> 5490784af0b469ef70e473c0fe33b7ba
>
> OMERO team
>
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