<div dir="ltr">Hi James,<div><br></div><div>Did you open the file using File > Import > Bio-Formats? If you used File > Open, and you don't have the SCIFIO option enabled (in Edit > Options > ImageJ2), then Bio-Formats will not be used, and the fact that the file is an OME-TIFF will not be detected.</div><div><br></div><div>Regards,</div><div>Curtis</div></div><div class="gmail_extra"><br clear="all"><div><div class="gmail_signature" data-smartmail="gmail_signature"><div dir="ltr"><div><div dir="ltr"><div><div dir="ltr"><div><span style="font-size:12.8px">--</span></div><div><span style="font-size:12.8px">Curtis Rueden</span><br></div><div><span style="font-size:12.8px">LOCI software architect - <a href="http://loci.wisc.edu/software" target="_blank">http://loci.wisc.edu/software</a></span></div><div>ImageJ2 lead, Fiji maintainer - <span style="font-size:12.8px"><a href="http://imagej.net/User:Rueden" target="_blank">http://imagej.net/User:Rueden</a></span></div><div>Did you know ImageJ has a forum? <a href="http://forum.imagej.net/" target="_blank">http://forum.imagej.net/</a></div><div><br></div></div></div></div></div></div></div></div>
<br><div class="gmail_quote">On Wed, Oct 12, 2016 at 5:21 AM, WAINWRIGHT James <span dir="ltr"><<a href="mailto:J.Wainwright@andor.com" target="_blank">J.Wainwright@andor.com</a>></span> wrote:<br><blockquote class="gmail_quote" style="margin:0 0 0 .8ex;border-left:1px #ccc solid;padding-left:1ex">
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<p class="MsoNormal"><span style="font-size:11.0pt;font-family:"Calibri",sans-serif">Hi there!<u></u><u></u></span></p>
<p class="MsoNormal"><span style="font-size:11.0pt;font-family:"Calibri",sans-serif"><u></u> <u></u></span></p>
<p class="MsoNormal"><span style="font-size:11.0pt;font-family:"Calibri",sans-serif">I seem to have problems opening OME TIFF with Bio-Formats, but I can’t tell if it’s the file or Bio-Formats at fault.<u></u><u></u></span></p>
<p class="MsoNormal"><span style="font-size:11.0pt;font-family:"Calibri",sans-serif"><u></u> <u></u></span></p>
<p class="MsoNormal"><span style="font-size:11.0pt;font-family:"Calibri",sans-serif">I’ve uploaded an example dataset as per the below. It has 4 Z and 3 time, but appears in FIJI as 12 time points.<u></u><u></u></span></p>
<p class="MsoNormal"><span style="font-size:11.0pt;font-family:"Calibri",sans-serif"><u></u> <u></u></span></p>
<p class="MsoNormal"><span style="font-size:11.0pt;font-family:"Calibri",sans-serif">Let me know if I can provide any more information.<u></u><u></u></span></p>
<p class="MsoNormal"><span style="font-size:11.0pt;font-family:"Calibri",sans-serif"><u></u> <u></u></span></p>
<p class="MsoNormal"><span style="font-size:11.0pt;font-family:"Calibri",sans-serif">Thanks!<u></u><u></u></span></p>
<p class="MsoNormal"><span style="font-size:11.0pt;font-family:"Calibri",sans-serif"><u></u> <u></u></span></p>
<p class="MsoNormal"><span style="font-size:11.0pt;font-family:"Calibri",sans-serif">James<u></u><u></u></span></p>
<p class="MsoNormal"><span style="font-size:11.0pt;font-family:"Calibri",sans-serif"><u></u> <u></u></span></p>
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<p class="MsoNormal"><b><span style="font-size:11.0pt;font-family:"Calibri",sans-serif;color:#1c2674">James Wainwright<u></u><u></u></span></b></p>
<p class="MsoNormal"><span style="font-size:11.0pt;font-family:"Calibri",sans-serif;color:#1c2674">Global Applications Specialist - Microscopy Systems<br>
<br>
<u></u><u></u></span></p>
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<p class="MsoNormal"><b><span style="font-size:11.0pt;font-family:"Calibri",sans-serif;color:#1c2674">Skype:
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<p class="MsoNormal"><b><span style="font-size:11.0pt;font-family:"Calibri",sans-serif;color:#1c2674">Mob:
</span></b><span style="font-size:11.0pt;font-family:"Calibri",sans-serif;color:#1c2674"><a href="tel:%2B44%20%280%29%207834%20710%20834" value="+447834710834" target="_blank">+44 (0) 7834 710 834</a><br>
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<p class="MsoNormal"><b><span lang="EN-US" style="font-size:11.0pt;font-family:"Calibri",sans-serif">From:</span></b><span lang="EN-US" style="font-size:11.0pt;font-family:"Calibri",sans-serif"> <a href="mailto:qa@openmicroscopy.org.uk" target="_blank">qa@openmicroscopy.org.uk</a> [mailto:<a href="mailto:qa@openmicroscopy.org.uk" target="_blank">qa@openmicroscopy.org.<wbr>uk</a>]
<br>
<b>Sent:</b> 12 October 2016 11:09<br>
<b>To:</b> WAINWRIGHT James <<a href="mailto:J.Wainwright@andor.com" target="_blank">J.Wainwright@andor.com</a>><br>
<b>Subject:</b> OMERO.qa - new feedback for QA Bug <u></u><u></u></span></p>
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