[ome-users] Problem importing multi-page tif

[posts at roeser-reichartshausen.de]

Good evening Curtis,

the problem does not seem to be the bit-depth change, since an image  
from my scanner with exactly this image structure as teh imagemagick  
one is imported with bio-formats correctly. My goal was to mimick the  
image from the scanner with imagemagick but got stuck with this problem.

I will upload the image to the bio-format team with comments.

Best wishes

Hermann-Josef


Zitat von Curtis Rueden <ctrueden at wisc.edu>:

> Hi Hermann-Josef,
>
> Thanks for the sample. I added it to our collection for SCIFIO, where we
> already have an issue filed for this problem:
>
>   https://github.com/scifio/scifio/issues/159
>
> In your case, it's a different bit depths rather than different dimensions,
> but the problem is the effectively the same.
>
> Sorry to say I don't have a timeline for fixing this, but it's on our radar.
>
> On the Bio-Formats side, I'm not sure whether there is an issue tracking
> this limitation yet.
>
> Regards,
> Curtis
>
> On Thu, Sep 24, 2015 at 10:08 AM, <posts at roeser-reichartshausen.de> wrote:
>
>> Hi Curtis,
>>
>> a sample image is on my server:
>> http://www.roeser-reichartshausen.de/Scans/Test.tif (250 MB)
>>
>> Thank you for looking into this.
>>
>> Hermann-Josef
>>
>>
>> Zitat von Curtis Rueden <ctrueden at wisc.edu>:
>>
>>
>> Hi Hermann-Josef,
>>>
>>> Can you share a sample image?
>>>
>>> Regards,
>>> Curtis
>>>
>>> On Thu, Sep 24, 2015 at 3:42 AM, <posts at roeser-reichartshausen.de> wrote:
>>>
>>>
>>>> Hello,
>>>>
>>>> my multi-page tif image, created with imagemagick, contains a 3x16bit RGB
>>>> image on page 1 and a 1x16bit B&W image on page 2. This image is not
>>>> correctly imported with bio-formats 5.1.4 into imageJ. However, it is
>>>> correctly opened in GIMP2 and IrfanView. So I suspect, there is a problem
>>>> with bio-formats input. However, other images with the same structure but
>>>> from a source different to imagemagick are imported correctly.
>>>>
>>>> Does anybody know this problem and a possible solution?
>>>>
>>>> Hermann-Josef
>>>>
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>>
>>
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