[ome-users] GatanReader bug

[Jean-Marie Burel (Staff)]

Thanks

I think you have found another bug with the reader
I will look at the issue later today
Cheers

Jmarie

From: ome-users <ome-users-bounces at lists.openmicroscopy.org.uk<mailto:ome-users-bounces at lists.openmicroscopy.org.uk>> on behalf of Martin Jones <Martin.Jones at crick.ac.uk<mailto:Martin.Jones at crick.ac.uk>>
Reply-To: OME User Support List <ome-users at lists.openmicroscopy.org.uk<mailto:ome-users at lists.openmicroscopy.org.uk>>
Date: Tuesday, 15 September 2015 14:36
To: OME User Support List <ome-users at lists.openmicroscopy.org.uk<mailto:ome-users at lists.openmicroscopy.org.uk>>
Subject: Re: [ome-users] GatanReader bug

Hi,

It might not be exactly the same file (I just chose a random uninteresting image), but it's from the same microscope.

here's the output from ./showinf -version

G12-Laptop02:bftools jones58$ ./showinf -version
Version: 5.1.4
VCS revision: 05840624ab3d1d1dca14d1ccfebabcb61c42ec27
Build date: 4 September 2015

I've run showinf again and it still produces the same error. I'll upload the file that produced this error as well. I checked and it opens OK in Amira.

Cheers,
Martin


On 15 Sep 2015, at 14:09, Jean-Marie Burel (Staff) <j.burel at dundee.ac.uk<mailto:j.burel at dundee.ac.uk>> wrote:

Dear Martin

Could you double-check the version of Bio-formats you are using? It looks like you are still using Bio-formats 5.1.3 (which does not include the fix)
I have opened without problem the file Example_MJ.dm4 you submitted 10 days ago. Did you have issue opening that file too?
You can download the latest version here http://downloads.openmicroscopy.org/bio-formats/5.1.4/

Regards
Jmarie

The University of Dundee is a registered Scottish Charity, No: SC015096
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Dr. Martin Jones

Electron Microscopy STP
The Francis Crick Institute
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The Francis Crick Institute Limited is a registered charity in England and Wales no. 1140062 and a company registered in England and Wales no. 06885462, with its registered office at 215 Euston Road, London NW1 2BE.

The University of Dundee is a registered Scottish Charity, No: SC015096
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