[ome-users] ImageJ-Omero problem

Wood, Christopher CJW at stowers.org
Wed Jun 10 22:23:16 BST 2015


HI,
I was trying out the save ROI feature in the plugin. It works as expected until I try to view the ROI in the insight plugin (see error below). The ROIs are all saved correctly: they can be viewed in the regular insight.app

I am using 5.1.2 server and client, both with Ice 3.5, both running on the same Mac, Mac OS Yosemite.
This happens with windows 7 as well.

Thanks
Chris

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no update needed
New update(s) found: 2.4.7 [http://www.terracotta.org/confluence/display/release/Release+Notes+Ehcache+Core+2.4]. Please check http://ehcache.org for the latest version.
Parsing credentials
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Switching to BigTIFF (by file size)
OMERO Version: 5.1.2-ice35-b45
Bioformats version: 5.1.1 revision: c608907bed553475bd9391d31868ca04a787480d date: 27 April 2015
Depth: 4 Metadata Level: MINIMUM
OMETiffReader initializing /var/folders/p_/_q13km4n1_l_m239h13462k8s9_w4f/T/10-1-13alphaGFPfcho.ome.tif
Reading IFDs
Populating metadata
1 file(s) parsed into 1 group(s) with 1 call(s) to setId in 72ms. (78ms total) [0 unknowns]
OMERO Version: 5.1.2-ice35-b45
Bioformats version: 5.1.1 revision: c608907bed553475bd9391d31868ca04a787480d date: 27 April 2015
Transferring /var/folders/p_/_q13km4n1_l_m239h13462k8s9_w4f/T/10-1-13alphaGFPfcho.ome.tif...
Exception in thread "Run$_AWT-EventQueue-0" java.lang.NoSuchMethodError: org.jhotdraw.draw.Drawing.addDrawingListener(Lorg/jhotdraw/draw/DrawingListener;)V
at org.openmicroscopy.shoola.agents.measurement.view.MeasurementViewerControl.attachListeners(MeasurementViewerControl.java:327)
at org.openmicroscopy.shoola.agents.measurement.view.MeasurementViewerUI.initialize(MeasurementViewerUI.java:462)
at org.openmicroscopy.shoola.agents.measurement.view.MeasurementViewerComponent.initialize(MeasurementViewerComponent.java:198)
at org.openmicroscopy.shoola.agents.measurement.view.MeasurementViewerFactory.createROIViewer(MeasurementViewerFactory.java:340)
at org.openmicroscopy.shoola.agents.measurement.view.MeasurementViewerFactory.getViewer(MeasurementViewerFactory.java:137)
at org.openmicroscopy.shoola.agents.measurement.MeasurementAgent.handleMeasurementToolEvent(MeasurementAgent.java:96)
at org.openmicroscopy.shoola.agents.measurement.MeasurementAgent.eventFired(MeasurementAgent.java:382)
at org.openmicroscopy.shoola.env.event.EventBusImpl.dispatch(EventBusImpl.java:91)
at org.openmicroscopy.shoola.env.event.EventBusImpl.post(EventBusImpl.java:222)
at org.openmicroscopy.shoola.agents.imviewer.view.ImViewerComponent.postMeasurementEvent(ImViewerComponent.java:495)
at org.openmicroscopy.shoola.agents.imviewer.view.ImViewerComponent.showMeasurementTool(ImViewerComponent.java:2006)
at org.openmicroscopy.shoola.agents.imviewer.actions.ROIToolAction.mouseReleased(ROIToolAction.java:144)
at java.awt.AWTEventMulticaster.mouseReleased(AWTEventMulticaster.java:273)
at java.awt.Component.processMouseEvent(Component.java:6414)
at javax.swing.JComponent.processMouseEvent(JComponent.java:3275)
at java.awt.Component.processEvent(Component.java:6179)
at java.awt.Container.processEvent(Container.java:2084)
at java.awt.Component.dispatchEventImpl(Component.java:4776)
at java.awt.Container.dispatchEventImpl(Container.java:2142)
at java.awt.Component.dispatchEvent(Component.java:4604)
at java.awt.LightweightDispatcher.retargetMouseEvent(Container.java:4618)
at java.awt.LightweightDispatcher.processMouseEvent(Container.java:4279)
at java.awt.LightweightDispatcher.dispatchEvent(Container.java:4209)
at java.awt.Container.dispatchEventImpl(Container.java:2128)
at java.awt.Window.dispatchEventImpl(Window.java:2492)
at java.awt.Component.dispatchEvent(Component.java:4604)
at java.awt.EventQueue.dispatchEventImpl(EventQueue.java:717)
at java.awt.EventQueue.access$400(EventQueue.java:82)
at java.awt.EventQueue$2.run(EventQueue.java:676)
at java.awt.EventQueue$2.run(EventQueue.java:674)
at java.security.AccessController.doPrivileged(Native Method)
at java.security.AccessControlContext$1.doIntersectionPrivilege(AccessControlContext.java:86)
at java.security.AccessControlContext$1.doIntersectionPrivilege(AccessControlContext.java:97)
at java.awt.EventQueue$3.run(EventQueue.java:690)
at java.awt.EventQueue$3.run(EventQueue.java:688)
at java.security.AccessController.doPrivileged(Native Method)
at java.security.AccessControlContext$1.doIntersectionPrivilege(AccessControlContext.java:86)
at java.awt.EventQueue.dispatchEvent(EventQueue.java:687)
at java.awt.EventDispatchThread.pumpOneEventForFilters(EventDispatchThread.java:296)
at java.awt.EventDispatchThread.pumpEventsForFilter(EventDispatchThread.java:211)
at java.awt.EventDispatchThread.pumpEventsForHierarchy(EventDispatchThread.java:201)
at java.awt.EventDispatchThread.pumpEvents(EventDispatchThread.java:196)
at java.awt.EventDispatchThread.pumpEvents(EventDispatchThread.java:188)
at java.awt.EventDispatchThread.run(EventDispatchThread.java:122)
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