[ome-users] PNM image not opened correctly

Stéphane Dallongeville stephane.dallongeville at pasteur.fr
Fri Feb 13 10:08:37 GMT 2015


Dear Mark,

Thanks for your fast reply, i'm glad to hear the problem is fixed in the 
incoming 5.1 version :)
Is there way to test it or we should wait a bit ? Thanks !

- Stephane

Le 13/02/2015 10:58, Mark Carroll a écrit :
> Dear Stéphane,
>
>> It looks like the PNM images files are not correctly opened (data seems
>> interleaved) in the last version of LOCI (tested with 5.0.7 and nighty
>> version). I attached an archive contening both the original PNM file and
>> the same image converted to TIF.
>
> You are quite correct: In testing using OMERO (using the corresponding
> Bio-Formats under the hood), the latest 5.0 build does something
> appalling to your PNM. Fortunately, the latest 5.1 build renders your
> PNM fine, matching your TIF most agreeably; the same is true of the
> showinf command-line tool. The Bio-Formats team may have more to add,
> but I can at least confirm that your issue is easily reproduced and that
> there is light at the end of the tunnel. Thank you for providing such a
> clear example of the bug.
>
> Cheers,
>
> Mark
>
> The University of Dundee is a registered Scottish Charity, No: SC015096
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