[ome-users] Suppress debug and exception output

[Curtis Rueden]

Hi Joe,

> 16:15:52.399 [main] DEBUG loci.common.services.ServiceFactory -
> CLASSPATH missing interface: loci.formats.services.MetakitService
> java.lang.ClassNotFoundException: loci.formats.services.MetakitService

The MetakitService interface and implementation are part of the formats-gpl
component. I see that once again, formats-gpl-5.1.2.jar is missing from
your list. If you put formats-gpl on the classpath, you should not see that
particular exception.

> Any idea how to suppress them?

If you do not want to include formats-gpl for some reason, then it might
work to provide a logback configuration to suppress it by setting the log
level to filter out DEBUG messages.

See http://imagej.net/Logging for further details.

Regards,
Curtis

On Mon, Aug 24, 2015 at 1:02 PM, Joe Ping-Lin Hsiao <phsiao at cs.unc.edu>
wrote:

> Hi Mark,
>
> I am using the .jar files from the build directory and they are:
>
> bsh-2.0b4.jar
> formats-api-5.1.2.jar
> formats-bsd-5.1.2.jar
> formats-common-5.1.2.jar
> guava-17.0.jar
> hamcrest-core-1.1.jar
> jace-runtime.jar
> jai_imageio-5.1.2.jar
> jcommander-1.27.jar
> jgoodies-common-1.7.0.jar
> jgoodies-forms-1.7.2.jar
> joda-time-2.2.jar
> junit-4.10.jar
> kryo-2.24.0.jar
> logback-classic-1.1.1.jar
> logback-core-1.1.1.jar
> lwf-stubs-5.1.2.jar
> metadata-extractor-2.6.2.jar
> minlog-1.2.jar
> mipav-stubs-5.1.2.jar
> native-lib-loader-2.0.2.jar
> objenesis-2.1.jar
> ome-xml-5.1.2.jar
> perf4j-0.9.13.jar
> serializer-2.7.1.jar
> slf4j-api-1.7.6.jar
> snakeyaml-1.6.jar
> specification-5.1.2.jar
> testng-6.8.jar
> turbojpeg-5.1.2.jar
> xalan-2.7.1.jar
> xercesImpl-2.8.1.jar
> xml-apis-1.3.04.jar
> xmpcore-5.1.2.jar
>
> So you mean I could swap some of them with bioformats_package.jar from the
> website?
>
> Thanks,
> Joe
>
> On Mon, Aug 24, 2015 at 5:10 AM, Mark Carroll <m.t.b.carroll at dundee.ac.uk>
> wrote:
>
>> Dear Joe,
>>
>>
>> I am using Bio-formats as a reader in my C++ program through the JACE
>>> C++ binding. When I run the 'showinf' program, I got a lot of debug and
>>> exception messages on the console
>>>
>> (snip)
>>
>>> Any idea how to suppress them?
>>>
>>
>> Are you using the new bioformats_package.jar or one of the LOCI jars
>> like loci_formats.jar or loci_tools.jar? There was a change in logging
>> library that may be relevant.
>>
>> Cheers,
>>
>> Mark
>>
>> The University of Dundee is a registered Scottish Charity, No: SC015096
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>>
>
>
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