[ome-users] Loading one series only

Thomas Julou thomas.julou at normalesup.org
Tue Apr 14 11:35:55 BST 2015


Hi Melissa,

>> Again, my question is really whether it’s possible to disable parsing metadata from other series (here positions, in order to reduce the loading time for a single series) or whether this is not supported by BF.
>> Thank you very much for your help. Best,
> 
> In that case, no, it is not currently possible to do this in general.
> If each series/position is in a single separate file, then you can do this by
> disabling file grouping, but otherwise the metadata from the whole
> dataset must be parsed first.

From a user perspective, it would be nice to be able to specify which series must be loaded and that this prevents parsing of other series’ metadata… but I’ve no clue though whether this makes sense and/or is doable in the more general bioformats (or scifio) framework.

Regards,

Thomas
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