[ome-users] Unable to open lif file

[Mai Tran]

Dear,

I cannot open some of my lif files and have no idea why that is. One of my
file opened fine but I don't know what was different about that one. Below
is the error message that I got. I've tried to update to the new bioformat
but that makes no difference.

LIFReader initializing C:\Users\maimisa\Desktop\Confocal\15_3_4_A549+CQ.lif
Reading header
Finding image offsets
Exception in thread "DrawAndDrop" java.lang.NumberFormatException: empty
String
at sun.misc.FloatingDecimal.readJavaFormatString(FloatingDecimal.java:992)
at java.lang.Double.valueOf(Double.java:475)
at java.lang.Double.<init>(Double.java:567)
at loci.formats.in.LIFReader.translateFilterSettings(LIFReader.java:1495)
at loci.formats.in.LIFReader.translateMetadata(LIFReader.java:1006)
at loci.formats.in.LIFReader.initMetadata(LIFReader.java:511)
at loci.formats.in.LIFReader.initFile(LIFReader.java:453)
at loci.formats.FormatReader.setId(FormatReader.java:1317)
at loci.formats.ImageReader.setId(ImageReader.java:753)
at io.scif.bf.BioFormatsFormat$Parser.typedParse(BioFormatsFormat.java:424)
at io.scif.bf.BioFormatsFormat$Parser.typedParse(BioFormatsFormat.java:406)
at io.scif.AbstractParser.parse(AbstractParser.java:253)
at io.scif.AbstractParser.parse(AbstractParser.java:336)
at io.scif.AbstractParser.parse(AbstractParser.java:52)
at io.scif.AbstractReader.setSource(AbstractReader.java:270)
at
io.scif.services.DefaultInitializeService.initializeReader(DefaultInitializeService.java:90)
at io.scif.img.ImgOpener.createReader(ImgOpener.java:540)
at io.scif.img.ImgOpener.openImgs(ImgOpener.java:145)
at
io.scif.services.DefaultDatasetIOService.open(DefaultDatasetIOService.java:123)
at
io.scif.services.DefaultDatasetIOService.open(DefaultDatasetIOService.java:109)
at io.scif.io.DatasetIOPlugin.open(DatasetIOPlugin.java:75)
at io.scif.io.DatasetIOPlugin.open(DatasetIOPlugin.java:50)
at
net.imagej.legacy.plugin.DefaultLegacyOpener.open(DefaultLegacyOpener.java:135)
at
net.imagej.legacy.DefaultLegacyHooks.interceptDragAndDropFile(DefaultLegacyHooks.java:360)
at ij.plugin.DragAndDrop.openFile(DragAndDrop.java)
at ij.plugin.DragAndDrop.run(DragAndDrop.java:152)
at java.lang.Thread.run(Thread.java:662)
Any help is appreciated.

Thank you so much

mai
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