[ome-users] omero 5.1.0 server might be broken on Ubuntu 14.0.4.x

Damir Sudar dsudar at lbl.gov
Fri Apr 3 01:39:43 BST 2015


Hi Jake,

I have the same exact warnings in my master.err on a Centos 6.6 server. 
But my server starts up fine albeit a little slower than the 5.0.x 
server did.

However, earlier today I did have the same thing happen to me with 
"omero admin start" taking a very long time and then aborting and 
killing off remaining stuff. The reason was that my DB was not the 
expected version and there were clear error messages related to that in 
Blitz-0.log. Maybe worth checking your Blitz-0.log for issues.

Cheers,
- Damir

On 4/2/2015 5:02 PM, Jake Carroll wrote:
> Hi.
>
> We've been running omero 5.xx.xx for a long time now on Ubuntu 14 series server environments.
>
> I upgraded our development host this morning to omero 5.1.0.
>
> For reference, the server:
>
> DISTRIB_ID=Ubuntu
> DISTRIB_RELEASE=14.04
> DISTRIB_CODENAME=trusty
> DISTRIB_DESCRIPTION="Ubuntu 14.04.2 LTS"
>
> Anyway - after upgrading to omero 5.1.0 in the usual way, I found that running an "omero admin start" end the end paused/failed then killed off remaining daemons/processes. In the master.err I found:
>
>
> omero at omero-devel-relegated:~$ tail -100 OMERO.server/var/log/master.err
> -! 04/03/15 09:38:20.041 OMERO.Glacier2: warning: unable to contact permissions verifier `BlitzVerifier at BlitzAdapters'
>     Reference.cpp:1663: Ice::NoEndpointException:
>     no suitable endpoint available for proxy `BlitzVerifier -t -e 1.1 @ BlitzAdapters'
> -! 04/03/15 09:38:20.043 OMERO.Glacier2: warning: unable to contact session manager `BlitzManager at BlitzAdapters'
>     Reference.cpp:1663: Ice::NoEndpointException:
>     no suitable endpoint available for proxy `BlitzManager -t -e 1.1 @ BlitzAdapters'
> -! 04/03/15 09:49:40.137 OMERO.Glacier2: warning: unable to contact permissions verifier `BlitzVerifier at BlitzAdapters'
>     Reference.cpp:1663: Ice::NoEndpointException:
>     no suitable endpoint available for proxy `BlitzVerifier -t -e 1.1 @ BlitzAdapters'
> -! 04/03/15 09:49:40.139 OMERO.Glacier2: warning: unable to contact session manager `BlitzManager at BlitzAdapters'
>     Reference.cpp:1663: Ice::NoEndpointException:
>     no suitable endpoint available for proxy `BlitzManager -t -e 1.1 @ BlitzAdapters'
>
> I'd not seen this behavior before.
>
> Ideas?
>
> Thanks, all!
>
> -jc
>
>
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-- 
Damir Sudar - Staff Scientist
Lawrence Berkeley Laboratory / Life Sciences Division
One Cyclotron Road, MS 977, Berkeley, CA 94720, USA
T: 510/486-5346 - F: 510/486-5586 - E: DSudar at lbl.gov
WWW: http://www.lbl.gov/lifesciences/labs/sudar_lab.html




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