[ome-users] OMERO.web installation under Ubuntu 14

Simon Li s.p.li at dundee.ac.uk
Tue Sep 30 14:26:10 BST 2014


Hi Unai

Could you try unsetting all of your omero.web.* configuration options,
regenerate your nginx or apache configuration files, restart OMERO and
OMERO.web, and seeing if that works?

Thanks

Simon

On 30/09/2014 08:34, "unai_lorenzo at ehu.es" <unai_lorenzo at ehu.es> wrote:

>Dear Simon,
>
>I'm using nginx/apache.
>I've also tried to access OMERO.web on the ports you suggested but it
>didn't work either.
>This is the output of `bin/omero config get':
>
>omero.data.dir=/home/jribecarios/OMERO
>omero.db.name=omero_database
>omero.db.pass=db_password
>omero.db.user=db_user
>omero.web.application_server=fastcgi
>omero.web.application_server.host=localhost
>omero.web.application_server.port=4080
>omero.web.force_script_name=/omero
>omero.web.static_url=/omero/static/
>jribecarios at jribecarios:~/omero/OMERO.server-5.0.4-ice35-b43$
>
>
>I hope it helps.
>
>Many thanks,
>Unai
>
>
>Simon Li <s.p.li at dundee.ac.uk> escribió:
>
>> Hi Unai
>>
>> Are you using the development web server, or nginx/apache? If it¹s the
>> latter then OMERO.web should be accessible on either port 80 or 8080
>> depending on your configuration, port 4080 is used for internal
>> communication.
>>
>> If this doesn¹t solve your problem could you paste the output of
>> `bin/omero config get`?
>>
>> Thanks
>>
>> Simon
>>
>> On 29/09/2014 16:58, "unai_lorenzo at ehu.es" <unai_lorenzo at ehu.es> wrote:
>>
>>> Dear OME users,
>>>
>>> I am trying to install OMERO.web under Ubuntu 14. I've been following
>>> all the instructions included in the web page, and everything seems to
>>> be OK: I could start the server,  and the OMERO.web client.
>>>
>>> $ bin/omero web start
>>>
>>> 0 static files copied, 816 unmodified.
>>> Starting OMERO.web... [OK]
>>>
>>>
>>> But I can't access OMERO.webadmin on the following address
>>> http://localhost:4080.
>>>
>>> Any guess about what's wrong? Could it be the something related to the
>>> the firewall and the TCP ports?
>>>
>>>
>>> Here you will find the diagnostics:
>>>
>>>
>>>========================================================================
>>>==
>>> ======
>>> OMERO Diagnostics 5.0.4-ice35-b43
>>>
>>>========================================================================
>>>==
>>> ======
>>>
>>> WARNING:omero.util.UpgradeCheck:UPGRADE AVAILABLE:Please upgrade to
>>> 5.0.5 See http://trac.openmicroscopy.org.uk/omero for the latest
>>>version
>>>
>>> Commands:   java -version                  1.7.0     (/usr/bin/java)
>>> Commands:   python -V                      2.7.6     (/usr/bin/python)
>>> Commands:   icegridnode --version          3.5.1
>>> (/usr/bin/icegridnode)
>>> Commands:   icegridadmin --version         3.5.1
>>> (/usr/bin/icegridadmin)
>>> Commands:   psql --version                 9.3.5     (/usr/bin/psql)
>>>
>>> Server:     icegridnode                    running
>>> Server:     Blitz-0                        active (pid = 4371, enabled)
>>> Server:     DropBox                        active (pid = 4403, enabled)
>>> Server:     FileServer                     active (pid = 4404, enabled)
>>> Server:     Indexer-0                      active (pid = 4383, enabled)
>>> Server:     MonitorServer                  active (pid = 4387, enabled)
>>> Server:     OMERO.Glacier2                 active (pid = 4394, enabled)
>>> Server:     OMERO.IceStorm                 active (pid = 4420, enabled)
>>> Server:     PixelData-0                    active (pid = 4410, enabled)
>>> Server:     Processor-0                    active (pid = 4416, enabled)
>>> Server:     Tables-0                       active (pid = 4412, enabled)
>>> Server:     TestDropBox                    inactive (enabled)
>>>
>>> OMERO:      SSL port                       4064
>>> OMERO:      TCP port                       4063
>>>
>>> Log dir:
>>> /home/jribecarios/omero/OMERO.server-5.0.4-ice35-b43/var/log exists
>>>
>>> Log files:  Blitz-0.log                    672.0 KB      errors=12
>>> warnings=6
>>> Log files:  DropBox.log                    3.0 KB        errors=0
>>> warnings=1
>>> Log files:  FileServer.log                 0.0 KB
>>> Log files:  Indexer-0.log                  21.0 KB       errors=13
>>> warnings=0
>>> Log files:  MonitorServer.log              2.0 KB
>>> Log files:  OMEROweb.log                   0.0 KB
>>> Log files:  OMEROweb_request.log           0.0 KB
>>> Log files:  PixelData-0.log                25.0 KB       errors=18
>>> warnings=1
>>> Log files:  Processor-0.log                2.0 KB        errors=0
>>> warnings=1
>>> Log files:  Tables-0.log                   2.0 KB
>>> Log files:  TestDropBox.log                n/a
>>> Log files:  master.err                     2.0 KB        errors=0
>>> warnings=4
>>> Log files:  master.out                     0.0 KB
>>> Log files:  Total size                     0.73 MB
>>>
>>>
>>> Environment:OMERO_HOME=(unset)
>>> Environment:OMERO_NODE=(unset)
>>> Environment:OMERO_MASTER=(unset)
>>> Environment:OMERO_TEMPDIR=(unset)
>>>
>>>Environment:PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin
>>>:/
>>> bin:/usr/games:/usr/local/games
>>> Environment:PYTHONPATH=(unset)
>>> Environment:ICE_HOME=(unset)
>>> Environment:LD_LIBRARY_PATH=(unset)
>>> Environment:DYLD_LIBRARY_PATH=(unset)
>>>
>>> OMERO data dir: '/home/jribecarios/OMERO'Exists? TrueIs writable? True
>>> OMERO temp dir: '/home/jribecarios/omero/tmp'Exists? TrueIs
>>> writable? True   (Size: 0)
>>> OMERO.web status... [RUNNING] (PID 11366)
>>>
>>>
>>> Many thanks in advance!!
>>>
>>> Best regards,
>>> Unai
>>>
>>> _______________________________________________
>>> ome-users mailing list
>>> ome-users at lists.openmicroscopy.org.uk
>>> http://lists.openmicroscopy.org.uk/mailman/listinfo/ome-users
>>
>>
>> The University of Dundee is a registered Scottish Charity, No: SC015096
>
>
>


The University of Dundee is a registered Scottish Charity, No: SC015096


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