[ome-users] Change Pixel Size information

Jean-Marie Burel j.burel at dundee.ac.uk
Thu Oct 9 14:01:07 BST 2014


Dear Christophe

Our clients do not offer that option but you can still modify the pixels size of the images (I assumed that is the physical size what you want to modify).
Certainly something we could add to the UI.
I have written a little python script that you can run server-side that will allow you to update the physical size, it takes image's Ids or dataset's Ids.

Cheers

Jmarie



From: Christophe TREFOIS <christophe.trefois at uni.lu<mailto:christophe.trefois at uni.lu>>
Date: Wednesday, 8 October 2014 17:01
To: "ome-users at lists.openmicroscopy.org.uk<mailto:ome-users at lists.openmicroscopy.org.uk>" <ome-users at lists.openmicroscopy.org.uk<mailto:ome-users at lists.openmicroscopy.org.uk>>
Subject: [ome-users] Change Pixel Size information

Dear OME'ers,

Is it possible to change the information about the pixel-sizes after import ?

Indeed, for many exisiting images it seems that pixel-size info was incorrectly stored with the image. Hence it would be beneficial to be able to correct for this once images are uploaded.

Any thoughts?

Thanks,


................................................................................

Dr. Christophe TREFOIS, Dipl.-Ing.
Doctor in Biology
Senior Technical Specialist

UNIVERSITÉ DU LUXEMBOURG



LUXEMBOURG CENTRE FOR SYSTEMS BIOMEDICINE

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