[ome-users] Fwd: OME @ UT Southwestern

[Liqiang Wang]

Thanks much, all. I do reinstalled system using the same ldap configuration and it works well.

Thanks
Liqiang

-----Original Message-----
From: Josh Moore [mailto:josh at glencoesoftware.com]
Sent: Wednesday, May 14, 2014 2:08 PM
To: Liqiang Wang
Cc: <ome-users at lists.openmicroscopy.org.uk>
Subject: Re: [ome-users] Fwd: OME @ UT Southwestern

Hi Liqiang,

could you possibly send us the var/log/Blitz-0.log file for your server? It would also be useful if you could show a working ldapsearch. Here's a search for myself:

ldapsearch -h ldap://ldap.lifesci... -p 389 -D cn=jamoore,... -b ou=lifesci,o=dundee 'cn=jamoore' uid cn sn mail objectClass ...
dn: cn=jamoore,ou=edir,ou=people,ou=lifesci,o=dundee
uid: jamoore
cn: jamoore
sn: Moore
mail: j.a.moore at ...
objectClass: posixAccount
objectClass: sambaSamAccount
objectClass: top
objectClass: inetOrgPerson
objectClass: person
objectClass: apple-user
objectClass: radiusprofile
objectClass: organizationalPerson

Cheers,
~Josh

On May 14, 2014, at 4:52 PM, Petr Walczysko wrote:

> Hi Liqiang
> Thank you for your answer.
> As Jean-Marie indicated below, it would be nice if we would get the help of the whole team for your problems as well as potentially other users.
> That is why I am forwarding your e-mail to one-users list.
> We will list your issue tomorrow on our Standup meeting as well and thus you will get quicker answer.
>
> All the best
> Petr
>
>
> Begin forwarded message:
>
> From: Liqiang Wang
> <Liqiang.Wang at UTSouthwestern.edu<mailto:Liqiang.Wang at UTSouthwestern.ed
> u>>
> Subject: RE: OME @ UT Southwestern
> Date: 14 May 2014 15:36:33 BST
> To: Jean-Marie Burel
> <j.burel at dundee.ac.uk<mailto:j.burel at dundee.ac.uk>>, Kenneth Gillen
> <k.h.gillen at dundee.ac.uk<mailto:k.h.gillen at dundee.ac.uk>>
> Cc: Petr Walczysko
> <p.walczysko at dundee.ac.uk<mailto:p.walczysko at dundee.ac.uk>>, Joshua
> Moore <j.a.moore at dundee.ac.uk<mailto:j.a.moore at dundee.ac.uk>>
>
> Thanks Much, All. Yep, there is a typo. But It is still not working. I will reinstall it and take another try today. Other questions, How can I setup port 80 for the web access? The default is 8080.
> Here is the output from omero config get omero at Debian-7:~$ omero
> config get omero.data.dir=/home/omero/OMERO.data
> omero.db.name=omero
> omero.db.pass=omero
> omero.db.user=omero
> omero.ldap.base=ou=users,dc=biohpc,dc=swmed,dc=edu
> omero.ldap.config=true
> omero.ldap.urls=ldap://192.168.54.1:389
> omero.ldap.user_filter=(objectClass=inetOrgPerson)
> omero.ldap.user_mapping=omeName=uid, firstName=cn, lastName=sn,
> email=mail
>
>
> Thanks
> Liqiang
> From: Jean-Marie Burel
> [mailto:j.burel at dundee.ac.uk<http://dundee.ac.uk>]
> Sent: Wednesday, May 14, 2014 5:20 AM
> To: Kenneth Gillen; Liqiang Wang
> Cc: Petr Walczysko; Joshua Moore
> Subject: Re: OME @ UT Southwestern
>
> Thanks Kenny for spotting the typo
> I read "true" myself ;-)
>
> Liqiang,
> Could I encourage you to use either our forum or our mailing lists when possible?
> Go https://www.openmicroscopy.org/site under Community to find the various links.
> That way members of the community might be able to help too and that will also reduce the risk of missing an e-mail.
> We review daily forum posts and e-mails from the mailing lists.
>
> Thanks
>
> Jmarie
>
>
> From: Kenneth Gillen
> <k.h.gillen at dundee.ac.uk<mailto:k.h.gillen at dundee.ac.uk>>
> Date: Wednesday, 14 May 2014 10:16
> To: jburel burel <j.burel at dundee.ac.uk<mailto:j.burel at dundee.ac.uk>>,
> Liqiang Wang
> <Liqiang.Wang at UTSouthwestern.edu<mailto:Liqiang.Wang at UTSouthwestern.ed
> u>>
> Cc: Petr Walczysko
> <p.walczysko at dundee.ac.uk<mailto:p.walczysko at dundee.ac.uk>>, Joshua
> Moore <j.a.moore at dundee.ac.uk<mailto:j.a.moore at dundee.ac.uk>>
> Subject: Re: OME @ UT Southwestern
>
> A first glance shows a couple of typos to the boolean value for the following:
>
> omero.ldap.config=ture
> omero.ldap.sync_on_login=ture
>
> I haven't looked further, but that's at least something to try.
>
> Best,
>
> Kenny
>
> --
>
> Kenneth Gillen
> OME System Administrator
>
> Wellcome Trust Centre for Gene Regulation & Expression College of Life
> Sciences MSI/WTB/JBC Complex University of Dundee Dow Street Dundee
> DD1 5EH United Kingdom
>
> Tel: +44 (0) 1382 386364
> Skype: kennethgillen
>
> http://www.twitter.com/openmicroscopy
>
> From: Jean-Marie Burel
> <j.burel at dundee.ac.uk<mailto:j.burel at dundee.ac.uk>>
> Date: Tuesday, 13 May 2014 22:08
> To: Liqiang Wang
> <Liqiang.Wang at UTSouthwestern.edu<mailto:Liqiang.Wang at UTSouthwestern.ed
> u>>
> Cc: Petr Walczysko
> <p.walczysko at dundee.ac.uk<mailto:p.walczysko at dundee.ac.uk>>, Joshua
> Moore <j.a.moore at dundee.ac.uk<mailto:j.a.moore at dundee.ac.uk>>, Kenneth
> Gillen <k.h.gillen at Dundee.ac.uk<mailto:k.h.gillen at Dundee.ac.uk>>
> Subject: Re: OME @ UT Southwestern
>
> Hi Liqiang
>
> Sorry for not replying earlier,  we are very busy at the moment with our coming release.
> I have forwarded your e-mail to josh moore (cc'd) Bringing our system
> administrator Kenny in the loop.
>
>
> Regards
>
> Jmarie
> From: Liqiang Wang
> <Liqiang.Wang at UTSouthwestern.edu<mailto:Liqiang.Wang at UTSouthwestern.ed
> u>>
> Date: Tuesday, 13 May 2014 17:31
> To: jburel burel <j.burel at dundee.ac.uk<mailto:j.burel at dundee.ac.uk>>
> Cc: Petr Walczysko
> <p.walczysko at dundee.ac.uk<mailto:p.walczysko at dundee.ac.uk>>
> Subject: RE: OME @ UT Southwestern
>
> Hi All,
> Any update for it?
>
> Thanks
> Liqiang
>
> From: Liqiang Wang
> Sent: Monday, May 12, 2014 2:12 PM
> To: 'j.burel at dundee.ac.uk<mailto:'j.burel at dundee.ac.uk>'
> Cc: 'p.walczysko at dundee.ac.uk<mailto:'p.walczysko at dundee.ac.uk>'
> Subject: OME @ UT Southwestern
>
> Hi Jean and Petr,
> I'm working on building the OME server. But the ldap authentication does not work. We are using openldap as our ldap. Here is OME ldap configuration. Also, how can I get ldap debug log from OME?
> ############################################
> # Ldap properties
> ############################################
> omero.ldap.config=ture
> omero.ldap.urls=192.168.54.1:389
> omero.ldap.username=
> omero.ldap.password=
> omero.ldap.base=ou=users,dc=biohpc,dc=swmed,dc=edu
> #omero.ldap.referral=ignore
>
> omero.ldap.sync_on_login=ture
>
> #omero.ldap.user_filter=(objectClass=person)
> omero.ldap.user_filter=(objectClass=inetOrgPerson)
> #omero.ldap.user_mapping=omeName=cn,firstName=givenName,lastName=sn,em
> ail=mail
> omero.ldap.user_mapping=omeName=uid,firstName=cn,lastName=sn,email=mai
> l
>
> #omero.ldap.group_filter=(objectClass=groupOfNames)
> omero.ldap.group_filter=(objectClass=posixGroup)
> omero.ldap.group_mapping=name=cn
>
> ## Without a prefix the "new_user_group" property ## specifies the
> name of a single group which all ## new users will be added to.
> omero.ldap.new_user_group=default
>
> Thanks
> Liqiang


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