[ome-users] Rendering image view settings on the OMERO web application

Moran Cabili-Kalmar nmcabili at broad.mit.edu
Thu Mar 13 14:41:03 GMT 2014


Hi Ola,

so I did manage to run a version of insight that let me update the setting
and do apply all- It seems like I would need to do that for each directory
, correct?
Can you please point me to a documentation that explains how omero decides
on the def setting of RGB, if one such exist?  I am actually not sure how
to set the ranges such that it which match my original image exactly.

thanks!

Moran



On Thu, Mar 13, 2014 at 8:47 AM, Moran Cabili-Kalmar <nmcabili at broad.mit.edu
> wrote:

> Dear Ola,
>
>
> Thanks so much for the quick response!
> the version is OMERO.web 4.4.9-ice34-b98
> I attach the image I uploaded and a snapshot of how it appears on the web
> server .
>  I am currently having some security problem with running insight on
> my computer but will try to solve this and write you back.
> either way I attach the image as it was uploded (this is an overlay), and
> provide a snapshoot for how it is displayed on the web application , which
> is different from the original image.
> if I set the red and green channel to display the max value as the maximal
> value in the range then I can see the correct image, but that is not seen
> by default, nor I was able to save this.
> I will need to save and apply this setting to all my images and I have a
> few hunderds f those.
> please let me know if I can provide more info.
> thanks so much!!!
>
> moran
>
>
> On Thu, Mar 13, 2014 at 6:03 AM, Aleksandra Tarkowska <
> A.Tarkowska at dundee.ac.uk> wrote:
>
>>  Dear Moran
>>
>>  Which version of OMERO software do you use?
>>
>>  Could you send us a screenshots showing the difference between Insight
>> and Web. Both clients uses the same resources and should display images
>> exactly in the same way.
>>
>>  If you feel your image is imported incorrectly by default please submit
>> original file to us and we will investigate it. You can upload it via our
>> support system http://qa.openmicroscopy.org.uk/qa/upload/
>>
>>  Kind regards
>> Ola
>>
>>
>> The University of Dundee is a registered Scottish Charity, No: SC015096
>>
>
>
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