[ome-users] Version of JAI for loading tiff images

Sebastien Besson s.besson at dundee.ac.uk
Tue Jan 28 11:10:49 GMT 2014


Hi Fethallah,

you could try using the jai_imageio.jar file that is available under
http://downloads.openmicroscopy.org/bio-formats (under the Components
section).
If that JAR still fails, would it be possible to upload a failing TIFF file
to http://qa.openmicroscopy.org.uk/qa/upload/ ?

Best,
Sebastien

On 28 Jan 2014, at 09:22, Fethallah Benmansour <fethallah.benmansour at gmail.com<mailto:fethallah.benmansour at gmail.com>> wrote:

Hi all,

I would like to read ome Multipage tiff files from matlab.
I first tried to read them with a standard multipage tiff reader and it didn't work.
Then, I tried  bfopen. I had the following error message:
Error using bfGetReader (line 80)
Java exception occurred:
loci.formats.MissingLibraryException: Java Advanced Imaging (JAI) is required to read some TIFF
files. Please install JAI from https://jai.dev.java.net/

I downloaded the latest vertsion of the jar file from http://www.oracle.com/technetwork/java/current-142188.html
and added it using javaaddclass.

Unfortunately it still crashes.
Could anyone tell me which version of jai*.jar is needed ?

Thanks into advance,

Kind regards,

--
Fethallah
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Dr Sébastien Besson
Open Microscopy Environment / Harvard Medical School
Wellcome Trust Centre for Gene Regulation and Expression,
College of Life Sciences, University of Dundee, Dow Street,
Dundee DD1 5EH Scotland UK   Tel: (01382) 386364


The University of Dundee is a registered Scottish Charity, No: SC015096
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