[ome-users] DeltaVision file format support

[Melissa Linkert]

Hi Lee and Carolina,

> > I have a collaborator that would like to load multi-channel 2D DeltaVision
> > files in CellProfiler.
> > I'm aware of the ImageJ plugin to load DeltaVision files, but it seems a
> > bit complicated to use the CellProfiler-ImageJ bridge to load images?
> > Do you think it will be possible to load DeltaVision files directly into
> > CellProfiler in the near future?
>
> Carolina, I was thinking I might take a shot at writing the image reader. I
> have the code for the ImageJ plugin and it has no copyright. Do you have an
> example file?

Maybe I misunderstand, but doesn't CellProfiler already have a way to
load images using Bio-Formats directly (without ImageJ)?  In that case,
Deltavision data should be supported, though if there are any issues on our
side we'd be happy to address them.

Regards,
-Melissa

On Mon, Jan 27, 2014 at 08:05:47AM -0500, Lee Kamentsky wrote:
> Carolina, I was thinking I might take a shot at writing the image reader. I
> have the code for the ImageJ plugin and it has no copyright. Do you have an
> example file?
> 
> --Lee
> 
> 
> On Mon, Jan 27, 2014 at 3:33 AM, Carolina Wählby <
> carolina at broadinstitute.org> wrote:
> 
> > Hi,
> > I have a collaborator that would like to load multi-channel 2D DeltaVision
> > files in CellProfiler.
> > I'm aware of the ImageJ plugin to load DeltaVision files, but it seems a
> > bit complicated to use the CellProfiler-ImageJ bridge to load images?
> > Do you think it will be possible to load DeltaVision files directly into
> > CellProfiler in the near future?
> > Best regards
> > Carolina Wählby
> >
> >