[ome-users] Import of Nikon Elements .jp2 to Fiji through LOCI fails

[Jonas Øgaard]

Dear all,

I'm experiencing the following error upon attempting to load a jp2-image
from Fiji through LOCI importer:

(Fiji Is Just) ImageJ 1.48q; Java 1.6.0_24 [32-bit]; Windows XP 5.1; 15MB
of 1529MB (<1%)

java.lang.StringIndexOutOfBoundsException: String index out of range: -11198
at java.lang.AbstractStringBuilder.substring(AbstractStringBuilder.java:881)
at java.lang.StringBuffer.substring(StringBuffer.java:416)
at loci.formats.in.NativeND2Reader.initFile(NativeND2Reader.java:1375)
at loci.formats.FormatReader.setId(FormatReader.java:1244)
at loci.formats.DelegateReader.setId(DelegateReader.java:252)
at loci.plugins.in.ImportProcess.initializeFile(ImportProcess.java:482)
at loci.plugins.in.ImportProcess.execute(ImportProcess.java:146)
at loci.plugins.in.Importer.showDialogs(Importer.java:141)
at loci.plugins.in.Importer.run(Importer.java:79)
at loci.plugins.LociImporter.run(LociImporter.java:81)
at ij.IJ.runUserPlugIn(IJ.java:199)
at ij.IJ.runPlugIn(IJ.java:163)
at ij.Executer.runCommand(Executer.java:131)
at ij.Executer.run(Executer.java:64)
at java.lang.Thread.run(Thread.java:662)

Any ideas?

Images have been uploaded at
http://qa.openmicroscopy.org.uk/qa/feedback/7906/?token=ec71294c4313b9e97c090f48afeeaaf4

//Jonas Ogaard
Research Institute for Internal Medicine,
Oslo University Hospital
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