[ome-users] Importing a file sequence into OMERO

Niko Ehrenfeuchter nikolaus.ehrenfeuchter at unibas.ch
Fri Aug 8 17:20:45 BST 2014


Dear all,

we're having a group here that has quite some stacks that were saved as 
separate TIFFs, one file per z-slice and per channel, following a naming 
scheme like this:

> username.txt
> username_z0000_w0000.tif
> username_z0000_w0001.tif
> username_z0001_w0000.tif
> username_z0001_w0001.tif
> username_z0002_w0000.tif
> username_z0002_w0001.tif
[...]
> username_z0012_w0000.tif
> username_z0012_w0001.tif
> username_z0013_w0000.tif
> username_z0013_w0001.tif

Is it possible to import them into OMERO so they're recognized / 
assembled as stacks instead of (Z x C) separate images?

Cheers
~Niko

-- 
Niko Ehrenfeuchter | Image Analysis Specialist | Biozentrum, University 
of Basel | Klingelbergstr. 50/70 | CH-4056 Basel
Phone: +41 (61) 26 72673 | nikolaus.ehrenfeuchter at unibas.ch | 
www.biozentrum.unibas.ch | www.microscopynetwork.unibas.ch



More information about the ome-users mailing list