[ome-users] bug opening tiled Zeiss 710 image?

[Cammer, Michael]

We just uploaded a file to your server via ftp that will not open using Loci in ImageJ.  The error messages are below.  Help woith this would be appreciated.

Thank you,

Michael

Drag & drop file error:
java.lang.NegativeArraySizeException
                at ij.io.ImageReader.read8bitImage(ImageReader.java:47)
                at ij.io.ImageReader.readPixels(ImageReader.java:768)
                at LSM_Reader.readStack(LSM_Reader.java:682)
                at LSM_Reader.open(LSM_Reader.java:551)
                at LSM_Reader.open(LSM_Reader.java:139)
                at LSM_Reader.open(LSM_Reader.java:111)
                at LSM_Reader.run(LSM_Reader.java:95)
                at ij.IJ.runUserPlugIn(IJ.java:193)
                at ij.IJ.runPlugIn(IJ.java:160)
                at ij.IJ.runPlugIn(IJ.java:149)
                at HandleExtraFileTypes.tryPlugIn(HandleExtraFileTypes.java:272)
                at HandleExtraFileTypes.tryOpen(HandleExtraFileTypes.java:152)
                at HandleExtraFileTypes.openImage(HandleExtraFileTypes.java:236)
                at HandleExtraFileTypes.run(HandleExtraFileTypes.java:37)
                at ij.IJ.runUserPlugIn(IJ.java:193)
                at ij.IJ.runPlugIn(IJ.java:160)
                at ij.IJ.runPlugIn(IJ.java:149)
                at ij.io.Opener.openWithHandleExtraFileTypes(Opener.java:434)
                at ij.io.Opener.openImage(Opener.java:306)
                at ij.io.Opener.openImage(Opener.java:329)
                at ij.io.Opener.open(Opener.java:142)
                at ij.io.Opener.openAndAddToRecent(Opener.java:242)
                at ij.plugin.DragAndDrop.openFile(DragAndDrop.java:176)
                at ij.plugin.DragAndDrop.run(DragAndDrop.java:152)
                at java.lang.Thread.run(Unknown Source)

Open from Plugins menu with menu error:
java.lang.NegativeArraySizeException
                at loci.formats.MinMaxCalculator.openBytes(MinMaxCalculator.java:263)
                at loci.formats.ReaderWrapper.openBytes(ReaderWrapper.java:308)
                at loci.formats.ReaderWrapper.openBytes(ReaderWrapper.java:308)
                at loci.plugins.util.ImageProcessorReader.openProcessors(ImageProcessorReader.java:190)
                at loci.plugins.in.ImagePlusReader.readProcessors(ImagePlusReader.java:416)
                at loci.plugins.in.ImagePlusReader.readPlanes(ImagePlusReader.java:380)
                at loci.plugins.in.ImagePlusReader.readImage(ImagePlusReader.java:277)
                at loci.plugins.in.ImagePlusReader.readImages(ImagePlusReader.java:238)
                at loci.plugins.in.ImagePlusReader.readImages(ImagePlusReader.java:216)
                at loci.plugins.in.ImagePlusReader.openImagePlus(ImagePlusReader.java:114)
                at loci.plugins.in.Importer.readPixels(Importer.java:150)
                at loci.plugins.in.Importer.run(Importer.java:89)
                at loci.plugins.LociImporter.run(LociImporter.java:81)
                at ij.IJ.runUserPlugIn(IJ.java:193)
                at ij.IJ.runPlugIn(IJ.java:160)
                at ij.Executer.runCommand(Executer.java:127)
                at ij.Executer.run(Executer.java:64)
                at java.lang.Thread.run(Unknown Source)


________________________________________________________
Michael Cammer, Assistant Research Scientist
Skirball Institute of Biomolecular Medicine
Lab: (212) 263-3208  Cell: (914) 309-3270

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