[ome-users] Bug Report: Opening color czi images

Roger Leigh r.leigh at dundee.ac.uk
Fri Jul 5 11:41:36 BST 2013


On 04/07/2013 07:49, Ayako Nakayama wrote:

> I have a problem opening color czi images.
> Some images are opened as blank images (no histogram).
> Some images are not opened with Exception messages. Please see the
> attached text.
> This problem seems to be connected to the color image format because I
> have no problem opening monochrome czi images.
>
> Bio-Formats version: 4.4.9
> Operating System: Windows 7 64-bit
> Java version:1.6.0_18
>
> I attached a non-working file and screenshots of the file.

Dear Ayako,

Many thanks for reporting this and providing the image samples.  I can
certainly reproduce this, and it looks like it's not correctly handling
RGB image places (as opposed to greyscale).  I've opened a ticket for
this and you should be notified of any changes made to it.

https://trac.openmicroscopy.org.uk/ome/ticket/11233


Kind regards,
Roger Leigh

--
Dr Roger Leigh -- Open Microscopy Environment
Wellcome Trust Centre for Gene Regulation and Expression,
College of Life Sciences, University of Dundee, Dow Street,
Dundee DD1 5EH Scotland UK   Tel: (01382) 386364

The University of Dundee is a registered Scottish Charity, No: SC015096




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