[ome-users] Installation feedback

Bernd Jagla bernd.jagla at pasteur.fr
Mon Feb 18 12:52:52 GMT 2013


Installation problems:

Rather a protocol of what I am doing...


1. After downloading the server I cannot find any 
installer/documentation inside the zip file...
    (I then found a link on the download page to a well written 
installation page)
2. 
https://www.openmicroscopy.org/site/support/omero4/sysadmins/windows/server-installation.html:
    - I am using Windows 7... It is not listed. I would like to see a 
table with the supported OSs... (that would give me confidence that 
someone was successful with this...)
    - a short explanation why the 32 bit version of Python is needed and 
not the 64-bit would help me to be more confident in what I am doing 
right now...
    - you write: "May already have been installed as a dependency of 
Matplot Lib." : how do I check this?
   - I am having problems compiling/installing NumPy, hopeing it is 
already installed...
    - with regards to pytables: I found 
http://www.lfd.uci.edu/~gohlke/pythonlibs/#pytables to be working the 
easiest..
     (now also installing numpy-MKL, scipy, ndimage, tables)
   - should I install the 32bit version of postgresDB? I believe not... 
going for 64Bit...
   - First, go to/File ? Options/select the/Browser/tab a should include 
"Display" (i.e. I believe the screen shots are different... I am using 
1.16.1 of pgAdmin)
    - diagnostics:
================================================================================
OMERO Diagnostics 4.4.6-ice34-b102
================================================================================

Commands:   java -version                  1.7.0 
(C:\Windows\system32\java.EXE)
Commands:   python -V                      2.6.6 (C:\Python26\python.EXE 
-- 2 others)
Commands:   icegridnode --version          3.4.2 
(C:\Ice\Ice-3.4.2\bin\icegridnode.EXE)
Commands:   icegridadmin --version         3.4.2 
(C:\Ice\Ice-3.4.2\bin\icegridadmin.EXE)
Commands:   psql --version                 not found

Server:     icegridnode                    not started

Cannot list deployed applications.

Log dir:    C:\omero.server\var\log        exists

Log files:  Blitz-0.log                    n/a
Log files:  DropBox.log                    n/a
Log files:  FileServer.log                 n/a
Log files:  Indexer-0.log                  n/a
Log files:  MonitorServer.log              n/a
Log files:  OMEROweb.log                   n/a
Log files:  Processor-0.log                n/a
Log files:  Tables-0.log                   n/a
Log files:  TestDropBox.log                n/a
Log files:  Total size                     0.00 MB

Error while parsing logs

Environment:OMERO_HOME=(unset)
Environment:OMERO_NODE=(unset)
Environment:OMERO_MASTER=(unset)
Environment:PATH=C:\Ice\Ice-3.4.2\bin;C:\Python26;C:\Program 
Files\ImageMagick-6.8.2-Q16;C:\Program Files (x86)\AMD 
APP\bin\x86_64;C:\Program Files (x86)\AMD APP\bin\x86;
C:\Program Files (x86)\Intel\iCLS Client\;C:\Program Files\Intel\iCLS 
Client\;C:\Windows\system32;C:\Windows;C:\Windows\System32\Wbem;C:\Windows\System32\WindowsPowerShel
l\v1.0\;C:\Program Files\Intel\Intel(R) Management Engine 
Components\DAL;C:\Program Files\Intel\Intel(R) Management Engine 
Components\IPT;C:\Program Files (x86)\Intel\Int
el(R) Management Engine Components\DAL;C:\Program Files 
(x86)\Intel\Intel(R) Management Engine Components\IPT;C:\Program Files 
(x86)\ATI Technologies\ATI.ACE\Core-Static;
c:\cygwin\bin;C:\Program Files\TortoiseSVN\bin;C:\Program 
Files\TortoiseGit\bin;C:\Program Files (x86)\CVSNT\;c:\ant\bin
Environment:ICE_HOME=(unset)
Environment:LD_LIBRARY_PATH=(unset)
Environment:DYLD_LIBRARY_PATH=(unset)

OMERO data dir: '/OMERO'        Exists? True    Is writable? True
OMERO.web status... [NOT STARTED]
============================================

-- I conclude that psql is not on the PATH... adding it...

-- "Server:     icegridnode                    not started"
  ??? never saw icegridnode before in the docs...
  --- searched for it on the installation web page... nothing...
   ---- searching FAQ : nothing...
   --- searching documentation ... nothing...

=> I am stuck...

I'll keep trying, but usually it is about now that I will do something 
stupid...

Be aware ;)

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